Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2527 ATGGCGCGGCTCATCGCGAAGCTGACGCTAATCGCATTCGCTCTAACGTTCCTCTTCTCTCCGTCGGATTCCGCCGTATTCAGCATAGATCTAGGCTCCGAATCGCTCAAGGTAACGGTGGTTAACCTAAAGCCAGGTCAGGCTCCGATCTCAGTCGCGATCAACGAGATGTCAAAGCGGAAATCGCCGGTGCTAGTTTCGTTCCACGACGGAGACCGTCTCCTCGGCGAGGAAGCAGCGGGTCTAGTCGCGCGGTATCCGCAACAGGTTTATTCTCAAATGAGAGACCTAATTGGGAAACCCTACGCTTCTGCTAAGAAGTTTCTAGATTCATTGTATTTACCTTTCGAAGCGAAGGAGGATTCTACAAGAGGCACTGTGAATTTCGTGGTTGACAAAAACGGCACCGAGTATTCGCCTGAGGAATTGGTTGCTATGGTTTTGAGTCACGCCGCGAATTTGGCTGAGTTTCATTCGAAGATTCCCATCAAAGACGCGGTGATTGCTGTTCCACCTTATTTCGGACAAGCTGAACGGAGAGGATTGCTTCAGGCGGCAGAGTTAGCCGGGATTAATGTTCTTTCGTTGATTAACGAGCATTCTGGTGCGGCGTTGCAGTATGGGATCGATAAGGATTTCTCAAACGAGTCAAGGCATGTAGTTTTCTATGATATGGGTTCTAGCAGTACCTATGCTGCACTTGTGTATTTCTCCTCTTATAAAAGTAAAGAGTATGGGAAGACAGTTTCGGTGAATCAGTTTCAGGTCAAGGATGTTCGTTGGAACCCTGAGCTGGGTGGTCAGCATATGGAATTGCGACTGGTAGAGTATTTTGCTAATGAATTCAATGCACAAGTTGGTGGTGGAATAGATGTGAGAAAATTTCCAAAGGCTATGGCTAAGTTAAAGAAGCAGGTTAAACGGACAAAAGAAATTCTCAGCGCAAACACTGGAGCTCCCATTTCTGTTGAGTCGCTTCATGGTGATGTGGATTTCAGGAGCTCAATAACCCGTGAGAAGTTTGAAGAGCTCTGTAAAGATATTTGGGAAAAATCTCTCTTACCATTGAAAGAGTTGCTTGAGCATTCAGGCTTGTCAACAGATCAAATATATGCAGTGGAGTTAATTGGAGGTGCTACCAGAGTGCCAAAGTTACAGGCTAAGCTTCAAGAGTTCCTTGGTAGAAAAGAACTTGATAGGCATCTTGACGCCGATGAAGCAATAGTTCTTGGTGCTGCTCTGCATGCTGCAAATATAAGTGATGGTATCAAATTAAATCGAAAACTAGGTATGGTTGATGGCTCCTTATATGAGTTTGTGATTGAATTGAGTGGCGCCGATCTTCCGAAAAGTGAAAGTTCTAGGCAGTTACTTGTACCTAAAATGAAGAAACTCCCGAGTAAGATGTTCAGATCCATTAATCATGACAAAGATTTTGAAGTTTCACTAGCTTATGAAAGTGAACATCTTTTGCCACCTGGTGTAACCTCTCCTTTAATTGCTCAATACCAAATATCTGGTTTAACAGATGCAAGTGGCAAATACTCATCTCGGAATCTGTCGTCCCCCATTAAGGCAAATGTACATTTCTCTCTTAGTAGAAGTGGAGTTCTTTCTCTGGATCGGGCAGACGCTGTTGTTGAAATAACAGAGTGGGTGGAAGTTCCCCGGAAGAACTTGACCGTAGAGAATTCAACTATTTCGTCAAATGTATCTGATGAATCTGGTGCTAGTAACAAATCTGACGAAAACAATGAAAGTGTGCAAAGTGATAGTGGTATTAGTAAGACATCTAATACGAGTGCAGAAGAGCAAGCTCCTGCTGAACCTGCTACAGAGAGAAAGCTGAAAAAACGGACCTTTAGGGTACCATTAAAGATTGTTGAGAAGACTACAGGACCGGGGATGTCTCTATCGGAAGATTTTCTTGCTGAAGCTAAAACAAAATTACAAGCACTAGACAAAAAAGACGCAGAAAGGAAACGGACAGCCGAGTCTAAAAATAATTTAGAAGGATATATATATACTACTAAAGAAAAGATTGAGACTCTTGAGGAGTTTGAAAAAGTTTCTACGAGTGAGGAACGTGAGTCCTTTGTTGAGAAGCTTAATGAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGCCAATGCCACAGAGTTTGAAGGGCGTCTGGATCAGTTGAAAGCTGTTGGAGATCCAATTTTCTTCAGGTTAAAAGAGCTTACAGCTCGACCAGCAGCAGTTGAGCATGCCCGCAAATACATTAATGAGCTGAAACAGATTGTAGAAGAGTGGAAAGCAAAGAAGTCTTGGCTTCCAAAAGAACGAGTAGATGAGGTGATTAATATTGCAGAAAAGTTAAAGAATTGGTTGGATGAGAAAGTAACTGAGCAAAAGACAACTTCTGGATTCAGTAAGCCTGCATTTACATCTGAAGAAGTACATCTAAAGGTGTTTGAACTGCAAAACAAGGTCGCCAGTATTAATAGAATCCCCAAGCCCAAGCCCAAGATTCAGAAGGCCACAAAGAATGAAAGTGAGAGCAATGAGCATACTACTGATAATTCTGATTCCACCTCAACTGATAGTTCCTCTAAAAGTGATGAATCTGCTAACCCGTCAAAAGGCGAAAGTGAAGAAAAGGTTGACGAGCAACCTGAAAGTCACGATGAGTTATGA 2685 0.4283 MARLIAKLTLIAFALTFLFSPSDSAVFSIDLGSESLKVTVVNLKPGQAPISVAINEMSKRKSPVLVSFHDGDRLLGEEAAGLVARYPQQVYSQMRDLIGKPYASAKKFLDSLYLPFEAKEDSTRGTVNFVVDKNGTEYSPEELVAMVLSHAANLAEFHSKIPIKDAVIAVPPYFGQAERRGLLQAAELAGINVLSLINEHSGAALQYGIDKDFSNESRHVVFYDMGSSSTYAALVYFSSYKSKEYGKTVSVNQFQVKDVRWNPELGGQHMELRLVEYFANEFNAQVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTGAPISVESLHGDVDFRSSITREKFEELCKDIWEKSLLPLKELLEHSGLSTDQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANISDGIKLNRKLGMVDGSLYEFVIELSGADLPKSESSRQLLVPKMKKLPSKMFRSINHDKDFEVSLAYESEHLLPPGVTSPLIAQYQISGLTDASGKYSSRNLSSPIKANVHFSLSRSGVLSLDRADAVVEITEWVEVPRKNLTVENSTISSNVSDESGASNKSDENNESVQSDSGISKTSNTSAEEQAPAEPATERKLKKRTFRVPLKIVEKTTGPGMSLSEDFLAEAKTKLQALDKKDAERKRTAESKNNLEGYIYTTKEKIETLEEFEKVSTSEERESFVEKLNEVQDWLYTDGEDANATEFEGRLDQLKAVGDPIFFRLKELTARPAAVEHARKYINELKQIVEEWKAKKSWLPKERVDEVINIAEKLKNWLDEKVTEQKTTSGFSKPAFTSEEVHLKVFELQNKVASINRIPKPKPKIQKATKNESESNEHTTDNSDSTSTDSSSKSDESANPSKGESEEKVDEQPESHDEL* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2527 894 MobiDBLite consensus disorder prediction 566 616 - -
Psa5g2527 894 CDD HYOU1-like_NBD 28 417 - -
Psa5g2527 894 Gene3D Actin; Chain A, domain 4 266 351 - -
Psa5g2527 894 MobiDBLite consensus disorder prediction 566 606 - -
Psa5g2527 894 MobiDBLite consensus disorder prediction 855 873 - -
Psa5g2527 894 Gene3D - 638 751 IPR029048 -
Psa5g2527 894 MobiDBLite consensus disorder prediction 874 894 - -
Psa5g2527 894 MobiDBLite consensus disorder prediction 840 854 - -
Psa5g2527 894 Gene3D - 212 399 - -
Psa5g2527 894 ProSitePatterns Heat shock hsp70 proteins family signature 3. 373 387 IPR018181 -
Psa5g2527 894 MobiDBLite consensus disorder prediction 831 894 - -
Psa5g2527 894 Gene3D - 92 146 - -
Psa5g2527 894 SUPERFAMILY Actin-like ATPase domain 26 211 IPR043129 -
Psa5g2527 894 PANTHER HSC70CB, ISOFORM G-RELATED 10 867 - -
Psa5g2527 894 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 427 573 IPR029047 -
Psa5g2527 894 Gene3D - 28 417 - -
Psa5g2527 894 PRINTS 70kDa heat shock protein signature 25 38 - -
Psa5g2527 894 PRINTS 70kDa heat shock protein signature 57 69 - -
Psa5g2527 894 PRINTS 70kDa heat shock protein signature 166 186 - -
Psa5g2527 894 PRINTS 70kDa heat shock protein signature 370 386 - -
Psa5g2527 894 PRINTS 70kDa heat shock protein signature 402 422 - -
Psa5g2527 894 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 665 747 IPR029048 -
Psa5g2527 894 Coils Coil 750 770 - -
Psa5g2527 894 Pfam Hsp70 protein 27 738 IPR013126 GO:0005524|GO:0140662
Psa5g2527 894 PANTHER BNAC07G50110D PROTEIN 10 867 - -
Psa5g2527 894 SUPERFAMILY Actin-like ATPase domain 217 418 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2527 Psa-Chr5 192295217 192303172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2527 27 544 Calmodulin-binding Proteins AT3G12580 28.190 2.81e-60 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2527 K09486 - gmx:100786898 1437.94