Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2486 ATGGAATTGTACAAGAATATCAAGGTTTTTGCCTTTTCTATCTTGATTTTTCTCGTAATCCCAACCCTAATTGCTGCAGAATGTACATGCGATGAGGAAGATGAAGATAGAAACAAATCCGAAGCTCTTCGTTATAAGATAGCAGCTTTAATATCGATAATGGTGGCAGGTGCAATCGGTGTTTGTATACCCCTTCTTAGCAAAGTTATACCGGCGTTAAGTCCCGAGAAGGATATATTTTTTGTCATCAAAACCTTTGCTGCCGGTGTGATATTATCTACCGCTTTCATACATGTGCTTCCAGATGCTTTTGAAAATCTTACTTCACCTTGTTTAAAGGAACATCCTTGGGGTGATTTTCCGTTCACCGGTTTTGTGGCTATGTGCACGGCTATGGGGACTCTTATGGTGGAGACTTACGCCACTTCTTATTTTCAAAACCAGAATTCTAAGAAGACACCGAAACAAGTCGAGAATCACGAGTCATGCTCAGATGTAGAGAAGCATGCAGGTCATGAAGGACATGTGCATGTTCATACGCATGCTTCACATGGTCATGCACACGGGCAGGTTTCTTCTTCGGATCGATCATCAGAACTTCTTCGTCATAGGATTATATCACAGGTATTGGAGTTGGGGATTGTTGTTCACTCTCTTATAATAGGAATTTCTCTTGGTACTTCGGAGAGTCCAAAGACCATAAAGCCACTGGTAGCTGCCTTAACTTTTCATCAATTTTTTGAGGGCATGGGACTTGGAAGTTGCATAACTCAGGCAAATTTCAAGAATCTATCTATTACTGTCATGGGATTGTTCTTTGCTTTGACAACTCCAATTGGAATTGGAATTGGCATAGGGATCAGTAGTGTTTATGACGAGAACAGTCCAACAGCCCTTATAGTTGAAGGAATCTTCAATGCAGCTTCAGCTGGAATCTTGATTTATATGGCACTTGTAGATCTTCTTGCTGCTGATTTTATGAATCCAAGGATGCAAAAGAGTGGTACTCTTCGATTAGGCTGTAATATATCTCTTCTGTTAGGAGCTGGTGCCATGTCTCTTATAGCCAAATGGGCTTAG 1080 0.4093 MELYKNIKVFAFSILIFLVIPTLIAAECTCDEEDEDRNKSEALRYKIAALISIMVAGAIGVCIPLLSKVIPALSPEKDIFFVIKTFAAGVILSTAFIHVLPDAFENLTSPCLKEHPWGDFPFTGFVAMCTAMGTLMVETYATSYFQNQNSKKTPKQVENHESCSDVEKHAGHEGHVHVHTHASHGHAHGQVSSSDRSSELLRHRIISQVLELGIVVHSLIIGISLGTSESPKTIKPLVAALTFHQFFEGMGLGSCITQANFKNLSITVMGLFFALTTPIGIGIGIGISSVYDENSPTALIVEGIFNAASAGILIYMALVDLLAADFMNPRMQKSGTLRLGCNISLLLGAGAMSLIAKWA* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2486 359 Pfam ZIP Zinc transporter 45 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Psa5g2486 359 TIGRFAM zip: ZIP zinc/iron transport family 28 359 IPR004698 GO:0005385|GO:0016021|GO:0071577
Psa5g2486 359 PANTHER ZINC/IRON TRANSPORTER 16 359 - -
Psa5g2486 359 PANTHER ZINC TRANSPORTER 1 16 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2486 Psa-Chr5 189939702 189941109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2486 25 359 Inorganic Solute Cotransporters AT3G12750 56.471 1.03e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2486 K14709 - gmx:547695 531.176