Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2468 ATGGGTAATATGACTATCAAATCAGACAGATCTTTACTTCAACATTGTGTTTATTTTCTCTTCTTGTTTTTTCTTGTGCTCTCTCTACATACACCCACCTTTGCACTCAAAAAGTCTTATGTGGTTTACTTAGGAGGACACTTACATGATTCAAATTCCTCATCAGTTGAGTTCAACCGTGCAAGTGATTCTCACTATGAGTTTCTAGAATCTTTCTTGAAAAGCTCCTCTGATACAGCAAAAGATTCAATCTTTTACTCCTACACAAGACATATCAACGGTTTTGCTGCAATTTTGGAAGAACAAGTAGCAGCTGAGATAGCAAAACATCCAAATGTGGTGTCGGTATTCGAGAATAAGGGAAAGAAACTACAGACGACACGATCATGGGGTTTCATGGGTTTAGAAGATGATAATGGAGTTATACCATCCAACTCAATATGGAAGAAAGCCAGATTTGGTGAAGATGTCATCATAGCTAACGTTGATTCGGGTGTTTGGCCTGAATCAGAGAGTTTTAGTGATGAAGGGTTTGGACCAATTCCATCTAAGTGGAGAGGAATCTGTGAAAAAGGATCTGATCTTCATTTCCACTGCAACAGGAAATTAATTGGGGCAAGGTACTTCAACAAAGGCTATGGTTCTAAATCATCTACCCCACTCAACTTGTCCTCTAACACCCCTCGTGACAATGATGGCCATGGATCCCATACATTATCAACAGCTGCTGGAAACATGGTACCTGGTGTAAGTTTCCTTGGTCAAGGTAATGGAACAGCAAAAGGCGGTTCACCAAAAGCAAGAGTTGCATCATACAAAGTTTGTTGGCCTTCACTTTTTGGTGGTATGTGCTCTGATGCAGACCTACTTGCAGCCTTTGATATGGCAATCCATGACGGTGTTGATGTTTTATCTTTGTCATTGGCTGGACGTACTTCTAGCTTTTTCAATGATAGTATTGCTATCGGTTCCTTCCATGCTGCTATGAAGGGTATTGTTGTTGTTTGCGCTGCTGGCAATGGAGGACCTTTTGATGAAACGGTTGGAAATCAAGCTCCATGGTATATTACAGTTGCTGCTAGCACTATGGACAGACAGTTCCCTAGTTATGTTGTTCTCGGTAACAATTTAACCTTAAAGGGGGAAAGCTTATCAGCTACAAGATTAGCACGCAAATTTTACCCAATTATTAAAGCAACAGATGCTAAATTGGCAAGTGCAACAAATGAAGATGCTGTGCTTTGCAAGAATGGAACTCTGGATCCTAAAAAGGTGAAGGGTAAGATAGTTGTGTGCCAGAATGGACAATATTCCGGATCAAATGAAGAAGAACGAGCTCTTAAAGCTGATGGTGCTGTGGGAATGGTCCTTTGCAATAATATGATTATTGACAATGTGATTACAGCGGCTCTTCATGTTCTTCCTACTTCTCACATCAGTTTCTCCGATGGTGTACAAGTCATTAACTATATCAACTCATCCAAGTCTCCGGTGGCTTATATTACATATCCAACAACAAAGCTGCATATTAAGCCGGCCCCTTTCATGGCAGTATTTTCATCCAAAGGACCAAATACTATTGTGCCTGAGATTCTGAAGCCCGATATCACTGCGCCAGGAGTGTTAGTTATTGCAGCCTACACTGAAGCGGAAGGGGCAACTAATCAAGTGTTCGACTATCACCGGGTTAAATATAAAGCACTGTTCGGCACTTCGATGTCATGCCCTCATATTTCGGGAATTGCAGGACTATTGAAAACCCTGTATCCTTCTTGGAGTCCTGCTGCTATTAAATCGGCTATCATGACCACAGCTACAACATTTGACAACGAGGCGGAGCCGCTGCTGAATGCATCCTACAGCCAAGCTACACCATTTAGCTATGGAGCAGGACATGTTCAACCTAACAATGCAATGGATCCTGGTCTTGTTTATGACACAACAATAGATGACTACTTCAACTGCTTATGTGTTTTGGGCATTAATGGAACTCAAAGGTCAATAATTTCAAATTCCACTTACCATTGCCATAAGAATTTCAATATCCTCAACCTAAACTACCCTTCAATCACTGTCCCAAATCTGTCTGGATCAGTGACAGTTAAGAGGACATTAAAAAATGTCGGTGCTCCAGCAACTTACACTGTTCATGTTCAGAATCCAAATGGGATATCTGTTTTTGTGAAGCCAAGTATATTGGAGTTCAAACATGTTGGTGAAGAAAAGAGGTTTGAAGTAAAATTGAAGGTACAGAAAGGAAAAGCAACAACCAACTATGTGTTTGGAAAAATGATTTGGTCAGATGGGGAGCATTATGTGCAAAGCCCATTAGTTGTGAAGGCTGTTAAACAGTTTTAG 2358 0.408 MGNMTIKSDRSLLQHCVYFLFLFFLVLSLHTPTFALKKSYVVYLGGHLHDSNSSSVEFNRASDSHYEFLESFLKSSSDTAKDSIFYSYTRHINGFAAILEEQVAAEIAKHPNVVSVFENKGKKLQTTRSWGFMGLEDDNGVIPSNSIWKKARFGEDVIIANVDSGVWPESESFSDEGFGPIPSKWRGICEKGSDLHFHCNRKLIGARYFNKGYGSKSSTPLNLSSNTPRDNDGHGSHTLSTAAGNMVPGVSFLGQGNGTAKGGSPKARVASYKVCWPSLFGGMCSDADLLAAFDMAIHDGVDVLSLSLAGRTSSFFNDSIAIGSFHAAMKGIVVVCAAGNGGPFDETVGNQAPWYITVAASTMDRQFPSYVVLGNNLTLKGESLSATRLARKFYPIIKATDAKLASATNEDAVLCKNGTLDPKKVKGKIVVCQNGQYSGSNEEERALKADGAVGMVLCNNMIIDNVITAALHVLPTSHISFSDGVQVINYINSSKSPVAYITYPTTKLHIKPAPFMAVFSSKGPNTIVPEILKPDITAPGVLVIAAYTEAEGATNQVFDYHRVKYKALFGTSMSCPHISGIAGLLKTLYPSWSPAAIKSAIMTTATTFDNEAEPLLNASYSQATPFSYGAGHVQPNNAMDPGLVYDTTIDDYFNCLCVLGINGTQRSIISNSTYHCHKNFNILNLNYPSITVPNLSGSVTVKRTLKNVGAPATYTVHVQNPNGISVFVKPSILEFKHVGEEKRFEVKLKVQKGKATTNYVFGKMIWSDGEHYVQSPLVVKAVKQF* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2468 785 Pfam Subtilase family 154 617 IPR000209 GO:0006508|GO:0008236
Psa5g2468 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 570 580 IPR023828 -
Psa5g2468 785 Gene3D - 656 782 - -
Psa5g2468 785 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Psa5g2468 785 PRINTS Subtilisin serine protease family (S8) signature 230 243 IPR015500 -
Psa5g2468 785 PRINTS Subtilisin serine protease family (S8) signature 569 585 IPR015500 -
Psa5g2468 785 PANTHER PEPTIDASE S8 25 781 - -
Psa5g2468 785 CDD PA_subtilisin_like 370 501 - -
Psa5g2468 785 SUPERFAMILY Subtilisin-like 125 643 IPR036852 GO:0004252|GO:0006508
Psa5g2468 785 Gene3D - 364 508 - -
Psa5g2468 785 Gene3D Peptidase S8/S53 domain 156 652 IPR036852 GO:0004252|GO:0006508
Psa5g2468 785 ProSiteProfiles Serine proteases, subtilase domain profile. 129 639 - -
Psa5g2468 785 Pfam Fibronectin type-III domain 684 779 IPR041469 -
Psa5g2468 785 Pfam PA domain 415 485 IPR003137 -
Psa5g2468 785 CDD Peptidases_S8_3 122 606 IPR034197 -
Psa5g2468 785 Pfam Peptidase inhibitor I9 39 120 IPR010259 -
Psa5g2468 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 125 IPR037045 -
Psa5g2468 785 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 25 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2468 Psa-Chr5 188285080 188289914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2468 39 780 Subtilisin-like Serine Gene Family AT2G04160 60.940 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2468 - - gmx:100794807 1110.52