Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2448 ATGGCTCGTGAACAACTAGGAGTTCTAAGTGCTCTTGATTCAGCCAAGACGCAATGGTACCATTTCACAGCCATCATAATTGCTGGTATGGGATTTTTCACTGATGCATATGATCTTTTTTGCATACCAAATGTTACAAAATTACTCGGAAGAATATACTACACACACCCGGATTCTCTAAAACCAGGAACTTTGCCTCCAAATGTATCAGCAGCTGTAAATGGTGTTGCACTTTGTGGCACTTTAGCAGGTCAACTTTTCTTTGGTTGGCTTGGGGACAAAATGGGAAGGAAAAAAGTTTATGGTCTAACTCTTGCTCTTATGGTGTTCTCTTCTCTTGCTTCTGGCCTTTCTTTTGGTCACTCAGCAAAGGGTACAATTGCGACTCTTTGTTTCTTTAGATTCTGGCTTGGTTTTGGTATTGGTGGCGATTACCCTCTTTCTGCTACCATCATGTCTGAATATGCTAATAAAAAGACGCGTGGCGCGTTTATTGCTTCCGTTTTCGCTATGCAAGGGTTCGGAATTTTGGCGGGTGGAATTGTTTCTCTTGTAGTTTCGACTGCTTTTGATCATGCTTATAAGGCTCCAGCTTATAAGGTGGATGCTGCAGCATCACTTGTACCAGAAGCTGATTATGTTTGGAGAATTATTCTCATGTTTGGTGCTGTCCCGGCTGGTTTAACTTATTATTGGCGTATGAAAATGCCCGAGACAGCGAGGTATACTGCACTTGTAGCTAAGAATGCAAAACAAGCGGCGCAAGACATGTCAATGGTGTTGCAGGTTGAAATTGAAGCCGAGCAAGAGAAAGTAGAGAAGATAGGAGTGAGAGAACAAAACAGTTTTGGTTTGTTTAGTAAAGAATTTCTTAGACGACACGGTCTTCATCTGCTCGGAACGACTTCTACCTGGTTTCTTCTTGACATTGCTTATTACAGCTCAAATCTTTTTCAAAAAGACATTTATAGTAGTATTGGTTGGCTTCCACCGGCCGAAGAAATGAACGCGATCCACGAAGTTTTCAAGGTTGCTAGAGCGACGACGCTTATAGCACTTTGTGGAACGGTTCCGGGATACTGGTTTACAGTGGCTTTTATCGACATAGTTGGCCGTTTCGCAATACAAATAATGGGATTTTTCTTTATGACCGTGTTCATGTTTGCCCTCGCGCTTCCGTATCATCATTGGACTAAGAAAGAAAACAGAGTTGGGTTTCTTGTTATGTACGCAATGACTTTTTTCTTTGCGAATTTTGGTCCAAACTCAACAACTTTCGTTGTGCCTGCCGAGATTTTTCCGGCTAGGTTGAGATCTACATGTCATGGAATATCTTCTGCGGCAGGGAAAGCCGGAGCAATCATAGGCGCATTTGGATTCTTGTATGCTTCACAAAGTAAGGATCCGAAAAAGAGAGATGCAGGGTACCCTGCTGGGATTGGAATGAAGAACACTCTTATTTTGCTTGCTGTGGTTAATTGTCTCGGCATATTTTTCACATTTCTTGTGCCGGAAGCTAACGGAAAATCGTTGGAAGAGATGAGTGGGGAGAATGAAGAAGATGAAGGTGGTGATTCTGTTGAAGCACAAGCCTCTTCTACTAGGACTGTTCCTGTGTGA 1620 0.4253 MAREQLGVLSALDSAKTQWYHFTAIIIAGMGFFTDAYDLFCIPNVTKLLGRIYYTHPDSLKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLALMVFSSLASGLSFGHSAKGTIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIASVFAMQGFGILAGGIVSLVVSTAFDHAYKAPAYKVDAAASLVPEADYVWRIILMFGAVPAGLTYYWRMKMPETARYTALVAKNAKQAAQDMSMVLQVEIEAEQEKVEKIGVREQNSFGLFSKEFLRRHGLHLLGTTSTWFLLDIAYYSSNLFQKDIYSSIGWLPPAEEMNAIHEVFKVARATTLIALCGTVPGYWFTVAFIDIVGRFAIQIMGFFFMTVFMFALALPYHHWTKKENRVGFLVMYAMTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISSAAGKAGAIIGAFGFLYASQSKDPKKRDAGYPAGIGMKNTLILLAVVNCLGIFFTFLVPEANGKSLEEMSGENEEDEGGDSVEAQASSTRTVPV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2448 539 MobiDBLite consensus disorder prediction 512 539 - -
Psa5g2448 539 CDD MFS_PhT 25 505 - -
Psa5g2448 539 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Psa5g2448 539 Gene3D MFS general substrate transporter like domains 272 531 IPR036259 -
Psa5g2448 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 526 - -
Psa5g2448 539 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 5 526 - -
Psa5g2448 539 TIGRFAM 2A0109: phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Psa5g2448 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Psa5g2448 539 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Psa5g2448 539 Pfam Sugar (and other) transporter 26 515 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2448 Psa-Chr5 186906584 186909287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2448 1 539 Inorganic Solute Cotransporters AT2G32830 76.568 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2448 K08176 - egr:104414513 862.062