Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2434 ATGGAAGCAAAGAAAGGGGAGGCACTTAAAGCGATAGAGAATGCAGAGAAAAGGTTTGCTCATAGAGATTTTGTTGGAGCGAAAAGTTATGCTTTAAAAGCCAAAACATTGTGTCCTGGATTGGAGGGTATATCTCAATTGGTGACCACTTTTGAAGTTTACATTGCCTCTCAAGTTACTTTTAATGGTGAACTCGATTGGTATTCCATTATGGGTTTAAAGCCTTCGACAAATATAGAAGCTGTGAAGAAACAGTACAAGAAGATGGCTGGGTTGCTTCATCCTGATAACAATAAGTGTGTCGGAGCGGATGGGGCGTTTCATCTTGTTTCTGAGGCATGGGCCAGGTTGTCTGGTAGTTATGATATGAAGAGAAATGCGCAATTAGGTAATGGGCATGGATTTAATCACAATGGTTTGTCTTCTATTCATGCCTCTAGTGGTAAACAGGACACTTTCTGGACAATTTGTACTTCTTGCAAAGTTCAGTATGAGTATCTGCGCAAGTATATAAATAAGAAACTTTCTTGTAAAAATTGCCGTGGGATTTTCATTGCTGTCGAAACAGCCCCGGCAAATGGTTCGTTCCCTTATTGTCCGTGGTCGTATGGGTCTAGCAGTGGTTATGGAAGCCATTCGTATGATGGAGTTACATATGCTCCCAGTAATGGCGCCTATTTCAACGGAAATGGGGTTACCGGATACCATTCGGCACACGGGTATGAGTATGTTTCTAATGTTCCATATCAATTGAACTCTGCTGGATATGTCAATCAAAATGGATCATCTACGTCACCTACTTGTCAGGCCAATGGGAATGTAAAGAGGGGAAGACCAAAAGTTAAATCAGAAGCTGATGTGAAGCATTGCATGACAGAGACATTGGTTAATATAAACTCAGTTGTATCATTCTCCCAGAATGAACTGCAAGAGGTTAAGCCGAGTAGACCTGAGAAGAAAAGGAAAGTTCTTGGAGCCAGTTTAAGAAATGGCCATGAAGGAAAGGGTTCAAAATGTGCCTCAGAGTCAGCATTGGCTAATGGGAATGGAAGCATTGGGCATGGCCAGAAGCTTTCCAGTACAAGTGAAATTCCAACAAAACAGTATTCCACGGCACCAGCTTTTGATGCAAGAAAATTATTGATCGAGAAGGCCAGGACAGAAATAAGGAAAAAACTGGAAGAGATGAAGTTGGCATCTGAAGCTGCAGCTGCTACTAATGAGAGAAAAAAATCTCAAGCTGATGTTGATCAGGTCGAAGGGGGTGCATACATTAAAGCAGCTCTTAATGTTTCTGATAATCAATTAGAACATAGGAAAACTGTTCCAGTGACAATTAGTGTCCCAGATTCCGACTTTCATGATTTCGATAAAGATAGGTCAGAGCCATGCTTCAAACCAAAGCAAATATGGGCCTTGTATGATGAGGAGGACGGGATGCCCCGCTTGTATTGTCTGATCCGCGAGGTTGTCTCTGTCAGTCCATTCAAGATTAACATTAGTTACTTGAGTTCGAAAACTGATAGTGAGTTTGGCTCAGTAAACTGGCTTGTTTCAGGTTTCACTAAATCCTGTGGAAATTTCAGGGCCATGACCTCTGATGTTGTCGACCAAGTTAACATTTTTTCTCATGTTCTAAGCAGGGTGAAGGCCGGTCGAGGCGGTTGTGTTCGCATATATCCCAAATGCGGAGAAATTTGGGCTGTTTACAGAAACTGGTCTACAGATTGGAATCATTCTACACCAGATGAGGTAAGGCATCAGTATGATATGGTGGAGGTACTGGACGATTATTCCGAGGAGCTTGGTCTTTGTGTTAGCCCCCTTATTAAGTTGGATGGATTCAAAACCGTGTACAAGAGGAATGCAGACAAAAGTGCCATTAGATGGATACCAAGAAAAGAAATGTTGCGTTTTTCGCACCAAGTGCCTTCGTGGTTGTTGAAGGGTGAGGAAGCAAGCAATTTGCCCAACAAGTGTTGGGACCTTGATCCAGCTGCAACTCCCGATGAACTCCTTCATGCTGCTATAGAAACAAACGCTTTGTAG 2049 0.4241 MEAKKGEALKAIENAEKRFAHRDFVGAKSYALKAKTLCPGLEGISQLVTTFEVYIASQVTFNGELDWYSIMGLKPSTNIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKRNAQLGNGHGFNHNGLSSIHASSGKQDTFWTICTSCKVQYEYLRKYINKKLSCKNCRGIFIAVETAPANGSFPYCPWSYGSSSGYGSHSYDGVTYAPSNGAYFNGNGVTGYHSAHGYEYVSNVPYQLNSAGYVNQNGSSTSPTCQANGNVKRGRPKVKSEADVKHCMTETLVNINSVVSFSQNELQEVKPSRPEKKRKVLGASLRNGHEGKGSKCASESALANGNGSIGHGQKLSSTSEIPTKQYSTAPAFDARKLLIEKARTEIRKKLEEMKLASEAAAATNERKKSQADVDQVEGGAYIKAALNVSDNQLEHRKTVPVTISVPDSDFHDFDKDRSEPCFKPKQIWALYDEEDGMPRLYCLIREVVSVSPFKINISYLSSKTDSEFGSVNWLVSGFTKSCGNFRAMTSDVVDQVNIFSHVLSRVKAGRGGCVRIYPKCGEIWAVYRNWSTDWNHSTPDEVRHQYDMVEVLDDYSEELGLCVSPLIKLDGFKTVYKRNADKSAIRWIPRKEMLRFSHQVPSWLLKGEEASNLPNKCWDLDPAATPDELLHAAIETNAL* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2434 682 SUPERFAMILY Chaperone J-domain 55 120 IPR036869 -
Psa5g2434 682 SMART dnaj_3 65 122 IPR001623 -
Psa5g2434 682 Gene3D DnaJ domain 54 123 IPR036869 -
Psa5g2434 682 PANTHER BNAC03G44070D PROTEIN 1 675 - -
Psa5g2434 682 PANTHER BNAC03G44070D PROTEIN 1 675 - -
Psa5g2434 682 Coils Coil 382 402 - -
Psa5g2434 682 CDD DnaJ 66 118 IPR001623 -
Psa5g2434 682 Pfam Domain of unknown function (DUF3444) 445 652 IPR024593 -
Psa5g2434 682 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Psa5g2434 682 Pfam DnaJ domain 66 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2434 Psa-Chr5 186437229 186440624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2434 5 243 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.517 9.11e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2434 - - gmx:100792639 1016.14