Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2423 ATGTTGGCTGAGATCGTGGTCATGTACCCAATTCAGCGCCGCAAGTACAGAAACAGAATTGACAACCTTTTGGTCCTTTTGATCGGAGGAATTCCTATTGCTATGCCCACTGTGTTGTTTGTAAATATGGCCATTGGTTCACACAGGCTCTTTCAGCAAGGAGCTATTACCAAGCGAATGACTGCTATTGAAGAAATGGTTGGTATGGATGTACTTTGCAGTGACAAGACTGGTACACTTACACTTCACAAGCTGAGTGTTGATAAGAACTTGATTGAGGTCTTTGAAAAGGGTTTGGACAAGGAACATGTTATGCTTCTTGCTGCAAGGGCTTCCAGGATTGAAAACCAGGATGCCAAAATTTTCGCCTCTCCAACCACAACCGATACCTGCAATCACCAGCAACATCCTGCAACATTGTCAACATTTTGCATCAATTAA 441 0.4308 MLAEIVVMYPIQRRKYRNRIDNLLVLLIGGIPIAMPTVLFVNMAIGSHRLFQQGAITKRMTAIEEMVGMDVLCSDKTGTLTLHKLSVDKNLIEVFEKGLDKEHVMLLAARASRIENQDAKIFASPTTTDTCNHQQHPATLSTFCIN* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2423 146 Gene3D - 1 69 - -
Psa5g2423 146 PANTHER CALCIUM-TRANSPORTING ATPASE 1 119 - -
Psa5g2423 146 Gene3D - 85 119 IPR023299 GO:0000166
Psa5g2423 146 SUPERFAMILY Calcium ATPase, transmembrane domain M 8 66 IPR023298 -
Psa5g2423 146 PANTHER PLASMA MEMBRANE ATPASE 1 119 - -
Psa5g2423 146 Gene3D - 70 84 IPR023214 -
Psa5g2423 146 ProSitePatterns E1-E2 ATPases phosphorylation site. 75 81 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2423 Psa-Chr5 185885809 185886249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2423 1 119 Primary Pumps ATPases AT2G07560 83.193 6.49e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2423 K01535 - csin:114306865 205.297