Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2406 ATGGCGGCGATCAGGAAAGGGAGTGTGAGTTTAGAGGGAAAGAAGGTTATACTAGTCCCTTATATGGAATCTCATGTCCCCAAATATCATGAATGGATGCAAAACCCTTCTCTCCTTCAAGCCACTGCCTCCGAACCCCTTTCCCTCGAACAAGAGTATCAGATGCAACTCTCTTGGTCATCTGATCTCAACAAAGAGACCTTCATTCTTTTGGATAAGGATTTGCTTCTTGGAACCTTCTCACACGGTCAACCTCACGTCGAAGTCATGGTTGGTGATGTAAATATTTTTATGAATGACATCAATAATCCTCAAATCGCTGAGATTGAAATTATGATTGCTGAACCTACCAGCCGTGGCAAAGGGCTTGGAAAGGAGTCTGTTCTGATGATGATGGCCTTTGCTATTGAAAAGTTAAGGATCAATCTCTTTGAGGTTAAAATTGGAGAATCAAATGTAGAATCCATCAACTTGTTCAAAAAATTGGGGTTTGTGGAAACTTCACATAGCAACATTTTCAAAGAGGTGACTTTGGAGTTGCAAATAACACAAGCCAAGAGTGAGGAGATGCTTGGTTTGATGGGTACTGTGATCAAACACACATAA 606 0.4109 MAAIRKGSVSLEGKKVILVPYMESHVPKYHEWMQNPSLLQATASEPLSLEQEYQMQLSWSSDLNKETFILLDKDLLLGTFSHGQPHVEVMVGDVNIFMNDINNPQIAEIEIMIAEPTSRGKGLGKESVLMMMAFAIEKLRINLFEVKIGESNVESINLFKKLGFVETSHSNIFKEVTLELQITQAKSEEMLGLMGTVIKHT* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2406 201 Pfam Acetyltransferase (GNAT) domain 16 165 IPR000182 GO:0016407
Psa5g2406 201 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 16 183 IPR000182 GO:0016407
Psa5g2406 201 Gene3D - 6 175 - -
Psa5g2406 201 PANTHER N-ACETYLTRANSFERASE 9 7 194 IPR039135 GO:0008080
Psa5g2406 201 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 167 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2406 Psa-Chr5 184779288 184784331 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Psa5g2406 Acetyltransf_3 4.2e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2406 K25762 - gmx:100817900 314.309