Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2390 TGGGATATACTTTCGCAAACACTTTCAATTCAACAATTCGCATGCATGGCTATCGGCGAACATATGGAGAATTGTGTTTCTCTGCTGCGAGCAAGTACTTCCGAGGACAAGACTGAAATCTTTTACCTACAAAAGAGTTACGCAGACGCATCAGCTTCCTACGTGGTTTATGCTCCACTAGACGAACCGGCATTGGTTCATCTTGCAAAAGGATTGAAACCAGACAATGTTATTGCATTTCCTTCAGGGTTTGCTATCATTCCGGGAGGGTTACCGAAAGATAATGGCAATAATGCTGGTAGCAATGAAAGTCTTCTAACTATCTCATTCAATCTAATTGATAAAGCCACCCATGTTTCACGTGTCCCTCCTGAGTCGGTTGAAACTATCTATAGGATCATTACAGAAACTGTTACTGCTATAAAGGATGTCATCAATAGTTTGAACTTGTTTTCTATAGTTCTAGCATTGTATAACCTATACAATACTTCTTGTAATGGTGATATGAAATCTGAAACCACTTGTAGCATGTGTACTGATGCTGGTTTCAAAGTAACTTCTCTGCTTGCAGATATTGATCCAAAAAATTCAACCAAGTGTTTTTACTTTTCAATTTTGTATGCTATTGGTATTGTGAATCAGTTTGGTCCTACAGATCCTGCTGCAGCTGCTTGTTATGCCACTTTCATCAAAAGGGTCATCAACAGGGTCATCATTCTTTCATCAAATAACATTACCCCACACTTTCTCTTCTTGCAGAATCACAAGCTCATTGTAGTGGAAGCAGATGGAAACTACGTGCACCCATTCGCCGTCGACGACATCGACATCTACTCCGGCGAAACCTATTCAGTTCTTCTCACAACAGATCAAGACCCAAACAAAAGCTACTGGCTCTCAATTGGCGTCAGAGGAAGAAAACCAAACACATCACAAGCCTTAACATTCCTCAACTACAAAACAATCTCCGCCTCCGTTTTCCCAACTTCACCACCGCCAGCCCTTAAGGTTTTTCACAAGGAAGTGCTCCTCTTCGTGGTTATCCACCTCATTGTAATTATCTTTTCACTCCTATCCGGGCTACAAATAATTTCTGTCAAAGCAGGAGGAATGATGTCACTTTCTATTGACAATCTTGGAGCCCTATGGATGTGGGGAAACTGTCCTAATCAAAGCAAAGACGGTATATTCTCAATAGTAAGCAATTTCACTCCTGAAGGTGAAAAATGGAAGATCGTTGCTGGAATCAGAT 1252 0.4089 WDILSQTLSIQQFACMAIGEHMENCVSLLRASTSEDKTEIFYLQKSYADASASYVVYAPLDEPALVHLAKGLKPDNVIAFPSGFAIIPGGLPKDNGNNAGSNESLLTISFNLIDKATHVSRVPPESVETIYRIITETVTAIKDVINSLNLFSIVLALYNLYNTSCNGDMKSETTCSMCTDAGFKVTSLLADIDPKNSTKCFYFSILYAIGIVNQFGPTDPAAAACYATFIKRVINRVIILSSNNITPHFLFLQNHKLIVVEADGNYVHPFAVDDIDIYSGETYSVLLTTDQDPNKSYWLSIGVRGRKPNTSQALTFLNYKTISASVFPTSPPPALKVFHKEVLLFVVIHLIVIIFSLLSGLQIISVKAGGMMSLSIDNLGALWMWGNCPNQSKDGIFSIVSNFTPEGEKWKIVAGIR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2390 417 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 148 IPR042160 -
Psa5g2390 417 SUPERFAMILY Cupredoxins 236 339 IPR008972 -
Psa5g2390 417 Gene3D - 165 343 IPR008972 -
Psa5g2390 417 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 1 148 - -
Psa5g2390 417 Pfam Multicopper oxidase 231 320 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2390 Psa-Chr5 184363488 184365539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2390 1 142 Homeobox Transcription Factor Family AT1G05230 39.161 5.58e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2390 K00423 - gmx:547647 157.147