Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2384 ATGAAGAAAAAGAAGAAGCAGCAGCTCAAGTTGAAATTTGGAGGTACGTCCTTGAGCATCCTTGTTAAGGCTTTTCCTTGGATTCGAGGAATTAACTTTGATCTTCCACACGTCATTGATGTGGCTCCAAAGTGTGATGGGGTAGAACATGTCGCAGGTGACATGTTTACAACTGTTCCCAAAGCCGATGCTGTCATTTTTAAGTGGGTTTTGCATGATTGGGGGATGAAGAGTGCATCCAAATCTTAA 249 0.4257 MKKKKKQQLKLKFGGTSLSILVKAFPWIRGINFDLPHVIDVAPKCDGVEHVAGDMFTTVPKADAVIFKWVLHDWGMKSASKS* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2384 82 PANTHER O-METHYLTRANSFERASE 15 77 IPR016461 GO:0008168
Psa5g2384 82 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 15 77 - -
Psa5g2384 82 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 82 IPR016461 GO:0008168
Psa5g2384 82 Pfam O-methyltransferase domain 15 78 IPR001077 GO:0008171
Psa5g2384 82 Gene3D Vaccinia Virus protein VP39 15 76 IPR029063 -
Psa5g2384 82 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 76 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2384 Psa-Chr5 184021340 184021870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2384 15 74 Monolignol Biosynthesis Gene Families AT5G54160 56.667 4.04e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2384 K22588 - twl:119992054 103.219