Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2335 GGATTTCACAAAATAAATCATGACAAATGGGAGTTTGCTAATGAATATTTTCGAAAAGATCAATATTATCTTCTTAGTAATATTCGCCGCAAGAAAACTGTTCACCGTCACTCTCGTGGAGAAGTAGAAAGGTCTACATTTGAAAAAGAAATTGAGAAACTTTCTAATGAAAAAGCCTCAATTGAATTAGATATTTCTAACTTCAAGCAGAAGATGCCAGCTAAAAAGCTTCATGTCGAAAATCTAATGCAAAGATTAGAAGCATTGGAGAAAAGGCATAATAATTTGAAGAACTCATTTGAAATGATTCTTCAAAATCCTATATTGGTTGAAAAAATGAATAAGAAAATTGAGTTCATTTTTTCCTTAAGGTTTTCCAATAAAAGACCTTTTCCTGATGTTGCTGAAAATGCTTTTGTTGAGAATGATAGCTACAATGGAGCTCTGAAAGTTGGAAATAGTATGACTGATAATGATAGCAACTTGGGGTTGATGGAAGTTGGAAATGATTTTACTGACATTGATACCAATTATGAATTTTTGAATTTTGAAAGGGTTGATGGAAGTTGGAAATGA 576 0.316 GFHKINHDKWEFANEYFRKDQYYLLSNIRRKKTVHRHSRGEVERSTFEKEIEKLSNEKASIELDISNFKQKMPAKKLHVENLMQRLEALEKRHNNLKNSFEMILQNPILVEKMNKKIEFIFSLRFSNKRPFPDVAENAFVENDSYNGALKVGNSMTDNDSNLGLMEVGNDFTDIDTNYEFLNFERVDGSWK* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2335 191 Coils Coil 44 106 - -
Psa5g2335 191 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 161 IPR027725 -
Psa5g2335 191 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2335 Psa-Chr5 180920976 180921911 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2335 1 145 HSF AT4G13980 35.333 5.11e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2335 K09419 - gmx:100786408 129.798