Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2305 ATGCTGAAATCCTTGAGGAAAATCTTATCCCTTCGATCGAAATATTGTATCAAACAAAGGAATTATGAACATGGTGAAAACTCGGAAGCTTTGTCTGTGCAGTTTCCGAATTGCAATGACTGCGTAGAGGAAAACAAACATTGCAATTGTGACCACATCGTTGCTGTCGAGGATAGAAAGAACAGTACTACTGCAGAAGGCGCTAGTGTCGACTCTAATAGTTCTTTTGTTCATTCTGTTATCAACATGGTGGGAATGCTCATAGGTTTGGGGCAATTATCAACTCCTTATGCTGTTGAAAAAGGAGGGTGGGGATCTGCATTATTGCTTATAGGACTTGGGGTAATATGTGCTTATACATCTCACATACTAGGAAAATGTCTTGAAAAGAATCCTAAGTTAACAAGTTATGTGGATATTGGGAATCAAGCATTTGGAACAAAAGGAAGATACCTAGTTGCAACATTTATCTACATGGACATCTTCATGGCACTTGTATCCTACACCATCTCATTACATGATAACTTGATTACTGTTTTTATAGGGACTCATCTGAAGATGAAGTTTGCTATGTTAACCTCATCGCAAATCATAGCCTTGGTGGCAATCTTGATTGCTTTGCCTAGTTTGTGGATCAGAGATATGTCTTGTATATCTTTCCTTTCAACCGGTGGAATTGTTATGTCTCTTCTCGTTTTCGCGTGTGTGGTAGCTACTGCAATTTTTGGAGTGGGTGAAGCTGGTAATAATCATAGTATACCTGTCTTCAAGCTACATAATATTCCATCAATATCTGGTCTTTATGTCTTTTGTTATGGAGGACATATTGTGTTTCCTGACTTGTATAAATCCATGAAAGACCCCTCCAAGTTCACCAAGGTTTCAATTGTGAGCTTCACAATAGCTATAGCATTTTACACCTCAATGGGATTTATGGGTGCAAAAATGTATGGAAATGATATTCAATCTCAGATAACTCTCAGCATGCCATCAAATCAAATCATAACAAAGATTGCTCTATGGGCAACCGTGTTGGTACCAATGACTAAATATGCACTTGAGTTTGCACCCTTTGCCATTCATCTTGAACAAACACTTCCAAATTCTTTGAATGGCAGGACAAAATTGGTAATAAGGGGTTGTGTAGCTTCATTTTTGCTATTGACCATACTAGTCCTTGCTCTATCAGTGCCATATTTTGAACACGTGCTTAGCCTCACTGGTTCACTACTTAGTGTAGCCATTTGTTTGGTTTTTCCATGTGTTTTCTATTTGAAGATTTTTTGGGGTAAAATTACTAGGTTTCTCTTGGTCCTTAATATTTCTTTAGTCATATTTGGGGTTCTTCTTGGTGGAATGGGTACCATTTCCTCCACAAAGTTAATATTGCAAAAACTTATATCACATCATTCAACTTGA 1419 0.377 MLKSLRKILSLRSKYCIKQRNYEHGENSEALSVQFPNCNDCVEENKHCNCDHIVAVEDRKNSTTAEGASVDSNSSFVHSVINMVGMLIGLGQLSTPYAVEKGGWGSALLLIGLGVICAYTSHILGKCLEKNPKLTSYVDIGNQAFGTKGRYLVATFIYMDIFMALVSYTISLHDNLITVFIGTHLKMKFAMLTSSQIIALVAILIALPSLWIRDMSCISFLSTGGIVMSLLVFACVVATAIFGVGEAGNNHSIPVFKLHNIPSISGLYVFCYGGHIVFPDLYKSMKDPSKFTKVSIVSFTIAIAFYTSMGFMGAKMYGNDIQSQITLSMPSNQIITKIALWATVLVPMTKYALEFAPFAIHLEQTLPNSLNGRTKLVIRGCVASFLLLTILVLALSVPYFEHVLSLTGSLLSVAICLVFPCVFYLKIFWGKITRFLLVLNISLVIFGVLLGGMGTISSTKLILQKLISHHST* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2305 472 Pfam Transmembrane amino acid transporter protein 73 456 IPR013057 -
Psa5g2305 472 PANTHER AMINO ACID TRANSPORTER AVT1H 36 468 - -
Psa5g2305 472 PANTHER OS05G0424000 PROTEIN-RELATED 36 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2305 Psa-Chr5 178651333 178654320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2305 38 470 Amino Acid or Auxin Permease AAAP Family AT5G16740 58.257 4.04e-168 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2305 - - lang:109342470 615.92