Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2297 ATGCCACGAATATTCCCTTTTGCTCTCTCTTTCGACGAGAGTCGATATTTTCAGATTTTGTCGCGAGGCCATCCTCACTCGTCCCTGATAATCGTTAGACACGAAAAAACTTTCCCCAATCTGCTTGAAGATCGGGATTTCTCTCCCAGCACGATACCTGATTTCGCTTTTTTTTCTCCATCCGATCTTACTTCATTCATAGGTAGACACGGAGGTTATCACGATCACAAATTCAGGCACAGTGAGTCGGATTTTGGCATTTCAAGGAGTGGTTTTACTACTAATAATTTTAATGAGGAGTATGATGGGATTAGAAATAATGGTAAGGGTCGGAGGAGGGATTCGAGAGATAGAGTTATTACAAGGGAGAGAGAAATTTCAAATGGTAGTTACCGGTCATCTTCGAGTAGGAGTGACTCTAGCAGTAGTGGCGGCCTTAGTGGCAGGCTTGGTCCTAGAAGATGTGATTTTCCTGTAAAGACTATGGATAGAGAGCCAGGCGAGCTTTCTAGTGAGAGTGTTAGGAGTGACTCTAGCAGTAGTGGCGGCCTTAGTGGCAGGCTTGGTCCTAGAAGATGTGATTTTCCTGTAAAGACTATGGATAGAGAGCCAGGCGAGCTTTCTAGTGAGAGTGGATCTGATGAGGGCGTTGAAGCAGAGTCACTGGTAAAACGCCATAAGGCTGTGATGGGTAAAGAGTTTGATTATGATGTTGAATCAGAATCACTCTTCAAACACCGCGAGGTTGCAATGGGCAAAGAAAATGGGACTCAATCTCCATTACAAAGGAAAAGGAAATTTTCACCAATAGTATGGGATCAAGATGACCACAAATTGACTAATTTATCCAAGCTTAAGGTTGTCACAACAGTGACTGCTGTTTCTCCACCACCTCCATTTCCAAGAGCAGTCAACGAGTCGCCTCATGTTCCTTACAATGGAGTTGAAGTTCTTCCTCCTGAGAATCCTGTGTTGTCGACTGCAATGGATCCTTCTATGGTGTCTGAGTCAGTTCAAGATGCTGAATCTGAGTCTCCTATAGGTTTGAATTCACTGTTGTCAGAGCAGAGGTTGGTTAATGGGAACACTGAGCAACCAGAAGTTGAAGATTACGTGTCAACTCGCAATATATCATCTTCAAGATGGGCATCTGGAGATGGCTCTTCGGATGATGAAGGTGAAATCATTGATGAGAAGGAAATCCTTAAAAAGAGGAGGCTATCTCTTGAGGCGGGTATGAAAATACGAAACAAGATGTTGAGACCAGAGGAATCTAAAATTGAAGGTTTTGAAAGGTCTAGAGGAAAATCATCTGAATCCGAAGAAAGAGGTAGCACTGGGAGATATTCCGGTGAAGATGATTATCCTGGTATTGAGGCAGGGAAGGACAACTACATGGAGATTGACAGCGGAGTTTGCAAAAGTGACGCAAGTGGTAGTCACACAAATACTGATTCTGAACGTGAAGACAATTACAGGGAAAGTATGGAATCTCTGTCTCCACCCCAGAGAGTTGTCAACATGCTTCAGGGGTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATTGATGAAGGAACATATGGTGTTGTATATAGGGCCAAAGACAAGAAGACCGGTGAAATAGTGGCACTGAAAAAGGTTAAGATGGAAAAGGAAAAAGAAGGCTTTCCACTGACTTCTCTGAGGGAAATAAACATACTTCTTTCCTTTCACCATCCATTCATAGTTGACGTTAAGGAAGTAGTGGTAGGTAGTAGCCTTGATAGTATTTTTATGGTTATGGAATACATGGAACACGATCTTAAAGGACTAATGGTGGCAATGAAGCAGCCATTTAGCCAGAGTGAAGTAAAATGCTTAATGCTCCAGCTGTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCACAGGGACTTGAAGACCTCAAACCTGCTTCTGAATAATAGGGGCGAGTTAAAAATTTGTGATTTTGGATTAGCTCGTCAGTATGGGAGTCCATTGAAACCTTATACATCATTGGTGGTTACTCTTTGGTACAGGGCTCCTGAACTTCTTTTGGGGACAAAGCAGTATTCAACAGCTATTGACATGTGGTCCCTGGGTTGTATAATGGCTGAGCTTTTGTCCAAGGAACCATTGTTTAATGGGAGGACTGAATTTGATCAACTTAACAAGATTTTCAGAATTCTTGGCACCCCAAATGAAACAATTTGGCCTGGGTTCTCAAAATTACCTCTAGTCAAGGCCAATTATGTCAAACATCAGTATAGTCTCCTGCGCAAAAAGTTTCCCGCAACATCATTCACTGGATCCCCAGTTCTTTCTGACTCTGGATTTGATTTGTTGAACAAGCTTCTCACTTATGACCCTGAAAAGAGGATCACCGCTGAAGATGCTCTCAACCATGAATGGTTTCGTGAAGTTCCCCTCCCCAAGTCTAAAGAATTCATGCCTACATTTCCTGCTCAACATGATAAAGAAAGGAGAATGCGAAGAATAATGAAGAGTCCACATCCGTTAGAGAAGCACCGGAAGGATTTGCAGCTGGGCGAATCAGGAACTGGTAGTATTTTTGGTTAA 2592 0.4267 MPRIFPFALSFDESRYFQILSRGHPHSSLIIVRHEKTFPNLLEDRDFSPSTIPDFAFFSPSDLTSFIGRHGGYHDHKFRHSESDFGISRSGFTTNNFNEEYDGIRNNGKGRRRDSRDRVITREREISNGSYRSSSSRSDSSSSGGLSGRLGPRRCDFPVKTMDREPGELSSESVRSDSSSSGGLSGRLGPRRCDFPVKTMDREPGELSSESGSDEGVEAESLVKRHKAVMGKEFDYDVESESLFKHREVAMGKENGTQSPLQRKRKFSPIVWDQDDHKLTNLSKLKVVTTVTAVSPPPPFPRAVNESPHVPYNGVEVLPPENPVLSTAMDPSMVSESVQDAESESPIGLNSLLSEQRLVNGNTEQPEVEDYVSTRNISSSRWASGDGSSDDEGEIIDEKEILKKRRLSLEAGMKIRNKMLRPEESKIEGFERSRGKSSESEERGSTGRYSGEDDYPGIEAGKDNYMEIDSGVCKSDASGSHTNTDSEREDNYRESMESLSPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPFIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMVAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTSLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGRTEFDQLNKIFRILGTPNETIWPGFSKLPLVKANYVKHQYSLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEDALNHEWFREVPLPKSKEFMPTFPAQHDKERRMRRIMKSPHPLEKHRKDLQLGESGTGSIFG* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2297 863 ProSiteProfiles Protein kinase domain profile. 518 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2297 863 Gene3D Phosphorylase Kinase; domain 1 503 600 - -
Psa5g2297 863 Gene3D Transferase(Phosphotransferase) domain 1 601 842 - -
Psa5g2297 863 MobiDBLite consensus disorder prediction 156 171 - -
Psa5g2297 863 MobiDBLite consensus disorder prediction 126 147 - -
Psa5g2297 863 MobiDBLite consensus disorder prediction 194 209 - -
Psa5g2297 863 MobiDBLite consensus disorder prediction 473 500 - -
Psa5g2297 863 MobiDBLite consensus disorder prediction 104 125 - -
Psa5g2297 863 SUPERFAMILY Protein kinase-like (PK-like) 510 815 IPR011009 -
Psa5g2297 863 CDD STKc_CDC2L1 512 809 IPR045267 GO:0004674|GO:0005524|GO:0006468
Psa5g2297 863 Pfam Protein kinase domain 518 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2297 863 MobiDBLite consensus disorder prediction 481 495 - -
Psa5g2297 863 PANTHER CELL DIVISION PROTEIN KINASE 244 863 - -
Psa5g2297 863 PANTHER - 244 863 - -
Psa5g2297 863 MobiDBLite consensus disorder prediction 842 863 - -
Psa5g2297 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Psa5g2297 863 MobiDBLite consensus disorder prediction 426 457 - -
Psa5g2297 863 MobiDBLite consensus disorder prediction 103 219 - -
Psa5g2297 863 SMART serkin_6 518 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2297 Psa-Chr5 178144519 178148277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2297 509 852 Core Cell Cycle Gene Families AT5G10270 45.404 6.22e-95 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Psa5g2297 Pkinase 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2297 K08818 - gmx:100793729 933.71