Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2234 ATGGCAGAGGAAGAAGAGAACGCGTTATCGGGTGAACCAGAGTTTCCGAAGAGTCGAGTGAAGAAGATAATAACACTGGACAAAGACGTGAAGAGAGTGAGTTCAGAAGCGTTGTTTCTGGTGTCGCGATCTACGGAGCTTTTTTTACAGTTACTTGCTGAAAAGTCTGCGCAGGTCGCAACTGAGAAGAAGCGCAAGACTGTAAAGCTTGAACATATAAGAATCGCGGTGAAGAGAAATCGGCATGTAAGTGATTTTCTTCTCGATTCGCTTCCGTTGCCTTCTGAAGGAACTAAATCTGATAATCCCGCGGTGGTTGTTGTTGATAAAGATAAATCTGTTCCGGTTGGTACTCGCCGCATTGATCATATATTCCGAAAGTCGGAAGCTCAAGTTGAGGCTGAGGCACCTGAACCGGCGCCTGAACCGGTGCCCGAACCCATGGAAGAGTCATAG 456 0.4693 MAEEEENALSGEPEFPKSRVKKIITLDKDVKRVSSEALFLVSRSTELFLQLLAEKSAQVATEKKRKTVKLEHIRIAVKRNRHVSDFLLDSLPLPSEGTKSDNPAVVVVDKDKSVPVGTRRIDHIFRKSEAQVEAEAPEPAPEPVPEPMEES* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2234 151 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 3 129 - -
Psa5g2234 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 77 IPR003958 -
Psa5g2234 151 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 3 129 - -
Psa5g2234 151 SUPERFAMILY Histone-fold 12 80 IPR009072 GO:0046982
Psa5g2234 151 Gene3D Histone, subunit A 1 92 IPR009072 GO:0046982
Psa5g2234 151 MobiDBLite consensus disorder prediction 127 151 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2234 3 134 CCAAT-HAP5 Transcription Factor Family AT5G43250 54.074 6.64e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Psa5g2234 CBFD_NFYB_HMF 5.1e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2234 - - vun:114164970 166.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2234 5 174476104 174476559 Psa5g2234 5 174476104 174476559 ECH