Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2208 ATGCCTTCCTCCGATGCCCATACCGCCGCCGCCCCTAATATCGTCCCCAAATGTATTCTCTTTAATGCCGCCTCTGGTGCTTCCGCCGGAGTTATTGCTGCTACGTTTGTGTGTCCTTTAGATGTTATCAAAACTAGGTTTCAGGTTCATGGTGTGCCCCACTTCGCTAATGGAACTGTTAAAGGCAGTGTAATAGTCAGCAGTTTACAACAGATCTTTCACAAGGAGGGGTTACGTGGCATGTACCGTGGATTGGCTCCTACTGTGCTAGCTTTGCTTCCAAATTGGGCGGTTTATTTTACTATGTATGAGCAGCTCAAAAGCCTTCTACATTCTGATGATGAAAACCATCATCACCTTCCGGTCGGAGCTAATATGGCAGCTGCTGCTGGGGCTGGAGCTGCAACTACCTTGTTTACAAATCCACTCTGGGTTGTCAAGACTAGGCTTCAAACCCAGGGAATGAGACCCGTTGTTGTACCATATAAGAGCACACTATCTGCGTTGAGGAGAATTGCACATGAGGAGGGCATACGGGGGCTGTACAGTGGCCTTGTACCTGCTCTAGCTGGTATCAGTCATGTTGCCATTCAATTCCCGATGTATGAAACAATAAAATTTTATTTAGCAAATCAAGATGACGCAGCAGTTGATAAACTTGGTGCACGTGATGTTGCTATTGCTTCATCAGTCTCCAAAATTTTTGCATCCACATTGACATATCCCCATGAGGTTGTACGTTCCAGATTGCAAGAACAAGGGCATCACTCAGAGAAACGATACTCTGGTATGACAGATTGTATTAAAAAGGTTTTTCAACAAGAAGGCATACCTGGTTTTTACCGAGGATGTGCCACCAACCTTTTGAGGACAACACCAGCTGCTGTAATCACATTCACCAGCTTTGAAATGATACACCGTTTTCTTGTTTCACATTTTCCTTCTGATCCACAACCTCATATTTTGTGA 969 0.4479 MPSSDAHTAAAPNIVPKCILFNAASGASAGVIAATFVCPLDVIKTRFQVHGVPHFANGTVKGSVIVSSLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTMYEQLKSLLHSDDENHHHLPVGANMAAAAGAGAATTLFTNPLWVVKTRLQTQGMRPVVVPYKSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPMYETIKFYLANQDDAAVDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGMTDCIKKVFQQEGIPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSHFPSDPQPHIL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2208 322 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 13 321 IPR044712 GO:0006862|GO:0055085
Psa5g2208 322 Pfam Mitochondrial carrier protein 22 112 IPR018108 -
Psa5g2208 322 Pfam Mitochondrial carrier protein 120 211 IPR018108 -
Psa5g2208 322 Pfam Mitochondrial carrier protein 226 311 IPR018108 -
Psa5g2208 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 308 IPR018108 -
Psa5g2208 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 109 IPR018108 -
Psa5g2208 322 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 13 321 - -
Psa5g2208 322 SUPERFAMILY Mitochondrial carrier 21 304 IPR023395 -
Psa5g2208 322 PRINTS Mitochondrial carrier protein signature 22 35 IPR002067 GO:0055085
Psa5g2208 322 PRINTS Mitochondrial carrier protein signature 35 49 IPR002067 GO:0055085
Psa5g2208 322 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
Psa5g2208 322 PRINTS Mitochondrial carrier protein signature 135 153 IPR002067 GO:0055085
Psa5g2208 322 PRINTS Mitochondrial carrier protein signature 229 251 IPR002067 GO:0055085
Psa5g2208 322 Gene3D Mitochondrial carrier domain 5 117 IPR023395 -
Psa5g2208 322 Gene3D Mitochondrial carrier domain 118 315 IPR023395 -
Psa5g2208 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 208 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2208 Psa-Chr5 173749273 173757423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2208 17 322 Chloroplast and Mitochondria Gene Families AT2G47490 76.797 9.22e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2208 K15115 - gmx:100500213 549.28