Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2204 ATGGCGGCTCTGTTACCTTGCACGCCGACTATACTCTCTGCTCCGTTTGCGAACCGGAGGAGTAACCATCTTCCACTTCGACCTCACTCCCACGCCTTCTCGGGTTCCGCCAAACGGTTTCTTCGCGGTTCTCTTTCCGTTACCCGGTTCGGTCTACAGCCCGGTTTTTTACCTGAACCGGATGACGCGGAATTCGTTATCAAAGAATTGTTTAACCGAGCGGAGGGTTTTCTTTACACAATTGCCGATGCTGCTGTTTCGTCTTCCGATACGGTGGTAACCACCACCGCCGTTAATCAGAGTAACGATTGGCTTTCTGGAATTACCAAATATTTGGAGACGGTTCTCATGGTACTCAAAGATGGACTTTCTACTTTGCATGCGCCGTACGCATATGGTTTTGCAATTATAATGCTCACTGTTCTTGTAAAAGCTGCCACATTTCCGCTGTCAAGAAAGCAGGTAGAATCTGCCATGGCTATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAGAAACAATATGCCGGGGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTATATAAATTAGCCAACATTAACCCTCTAGCAGGATTCCTGCCTATTCTCTTAACAACACCAGTGTGGATCGGGCTATATCGAGCCTTTTCTAATGTGGCAGATGAGGGACTCCTTAATGAAGGTTTCTTTTGGATACCTTCTCTTTCTGGTCCTACTACAATTGCAGCACGGCAAAATGGAAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGCCAGCCTCCCCTTGGATGGCCAGATACACTGGCTTACCTTGTCTTGCCTGTTTTGCTGGTTGTCTCTCAATACATTTCTATTCAAATAATTCAGTCATCACAGGCTACTAACCCCAACACGAAGAGTTCTCAAATCTTAAACAAGTTACTTCCATTAGTGATTGGTTATTTTTCTCTTTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTCACAAATAATATATTGAGCACTTTACAGCAAATATGGCTTATAAAGTTAGGAGGTGCAAAAAATCCTTTGAGACAAGTTCTAGATGATAATCTGAAAAATGACCTAATACAGACACAGAAGCCAGTATCTAAACTAAATTCCACAAAAGTTGAAGAAACTAGAAAAGTTGAAAAGTTGACATCAGAGGGACCACAACCTGGTGACAGATTTAAGCAATTAATGGAACAAGAGGCAAGGAAGAAACAAAAGAGAGAAGAAGAAAAAAGGAAAGCTGAAGAAGCAGCAGCTAAAGCTAATCACGAGCAAACAATTGAAGGGGAAAATCAAGCTGTGAACGGCTTAGTTGAAAATTCCCAATCCGTGGCTGCTGATACGGATCCATCTATAACTGGAGTAGTAAATGGTAATCCATTAAGTAAGGACTTGGAGGGAAATCAGAATTCTACCTCTACATCTGATACTGAAAATGGCGAAGGTTCTGCAAATTTCAATGCAGTAAACGAGAAAAATCTAGAAAAGGAACCGAGAGAAGTACTAACAACCACAGCTACTACAAACAAGCTACCTCAAGAAGAAGACCCAGATCGTGTGGCAAAGGATTGA 1596 0.4261 MAALLPCTPTILSAPFANRRSNHLPLRPHSHAFSGSAKRFLRGSLSVTRFGLQPGFLPEPDDAEFVIKELFNRAEGFLYTIADAAVSSSDTVVTTTAVNQSNDWLSGITKYLETVLMVLKDGLSTLHAPYAYGFAIIMLTVLVKAATFPLSRKQVESAMAMRSLQPQVKAIQKQYAGDQERIQLETARLYKLANINPLAGFLPILLTTPVWIGLYRAFSNVADEGLLNEGFFWIPSLSGPTTIAARQNGSGISWLFPFVDGQPPLGWPDTLAYLVLPVLLVVSQYISIQIIQSSQATNPNTKSSQILNKLLPLVIGYFSLSVPSGLSLYWFTNNILSTLQQIWLIKLGGAKNPLRQVLDDNLKNDLIQTQKPVSKLNSTKVEETRKVEKLTSEGPQPGDRFKQLMEQEARKKQKREEEKRKAEEAAAKANHEQTIEGENQAVNGLVENSQSVAADTDPSITGVVNGNPLSKDLEGNQNSTSTSDTENGEGSANFNAVNEKNLEKEPREVLTTTATTNKLPQEEDPDRVAKD* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2204 531 MobiDBLite consensus disorder prediction 453 498 - -
Psa5g2204 531 Coils Coil 373 393 - -
Psa5g2204 531 MobiDBLite consensus disorder prediction 377 438 - -
Psa5g2204 531 PANTHER BNAA09G28180D PROTEIN 14 463 - -
Psa5g2204 531 MobiDBLite consensus disorder prediction 378 395 - -
Psa5g2204 531 MobiDBLite consensus disorder prediction 453 531 - -
Psa5g2204 531 Pfam 60Kd inner membrane protein 132 345 IPR001708 GO:0016021|GO:0032977
Psa5g2204 531 Coils Coil 401 434 - -
Psa5g2204 531 PANTHER OXA1 14 463 IPR001708 GO:0016021|GO:0032977
Psa5g2204 531 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 132 345 IPR028055 -
Psa5g2204 531 MobiDBLite consensus disorder prediction 403 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2204 Psa-Chr5 173636512 173643039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2204 62 419 Chloroplast and Mitochondria Gene Families AT2G28800 51.667 9.50e-124 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2204 K03217 - gmx:100802546 726.857