Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2175 ATGCAAATTGTTGGGGGGCATCATAGTGAAATATGGACATTAGATGTTGATCCTGCTGAGAGGTATCTTGTAACCGGTTCAGCGGACAAGGAACTTCGTTTTTATACAATTAAGCAAGATTCTGTGGATAGGGAGTCTATAAATGACGGTGGATATTCTTCTGTTTCAAACAAATGGGATGTTTTGACGCATTTTGGTGAGATTCAGCGGCAGAATAAAGATAGAGTTGCCACTGTCCAGTTCAACAAGTCTGGGAATTTGCTAGCATGTCATGTTGCGGGAAAGATGGTAGAAATATTCTGTGTATTGGATGATGCCGAAGCAAAGCGTAAAGCCAAACGTAGGGTTAAGCGCAAAAAGGAGAAGAAGCATGGTAAAAAGGCTACAGAGGGAGCTGAACATGGAGGTGAGAGTAATGAGAACAAAGGAGATAATTCTACTTTGACCGATGGACCCATAGAAACAAGGGAATTCATACGATTCAGTTGTGGTGGCGAAGTCGCAGGTGATTTTGTGGTGCTATCGGCAGGGGATTCGCCGACAACATCCAACACAAGTTGCCTATCCCGAACATCTCCTTCTCAGCTACTCTTGGAGCACAAGTTCACACTATGGTGTTTATGTAGTCTGATTTCCTTGAAAAAAACCTTTCCAAAACTTCATTACAGAGGCACATTTGGACATGTCTATATTGGCTTTAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTATGTTTTCGGATGATGCCAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGAAATTCATTTGTTGAGCCGTTTAAGACATCCAAATATTGTGCAATATTATGGTTCTGAAAAAGTAGATAACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGCTATTCATAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTCTTCATAGGGACATCAAAGGAGAAAACATACTGGTAGATCCAAATGGTCGGGTCAAGGTTGCAGACTTTGACGTGGCAAAACATATAACAGGGCAATACTGTCCTGTGTCGTTCAAAGGAAGTCCTTATTGGATGGCTCCCGAGGTTATAAAGAATTCCAAGGAATGCAGCCTTGGTGTGGATATATGGAGTCTTAGATGCACAGTTTTGGAAATGGCTACAACTAAGCCTCCTTGGTCTCAATATGAAGGGGTTGCTGCCATGTTCAAAATTGGTAACAGCAAGGAGCTCTCAACAATCCCGGAACATCTTTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTTTACAACGTAATCCGCGTGATCGTCCTTCGGCAAGTGAATTATTGGACCACCCTTATGTAAAAGGTGTTGCACCTTTAGAAAGACCTATTATGGTTCCTGAAGCTTCAGACCCTATTTCTGGAATTACACACGGGACAAAAGCTCAGGGCATTGGACAAGGAAGAAATTTGTCTGCTTTGGATACAGATAAACTCTTAATTCATTCTTCCAGGGTTTTGAAAAGTAACCCTAATGAAAGTGAAAACCACATTCAAAGGAATATATCTTGCCCAGTTTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACATCAGAGAAGTGATAGTTTGTCTCCTTCTCCTATATCTAGCCATCAGGCTGCTTCTGGTGCATCCGCACCTCTCACTGGCGGTGGCAGTGGTGCCATTCCATTCAGTAATCACTTGAAACAGTCAATTTACTTTCCAGAGTGTCTTGGAAGCATACCGAAATCCTCAAACTACACACACACCAACTCAAAGCCATTCATAACCATACGAACTCCTCCTAATGAATACCATGAACCTTTACACCCACAAATTCAGCATGTCCTTCTGCAGCATCAAACGCAACGAGTTCTGCGTAAATTCACCAAGTCTCGATGTACTAAGATGGCATGA 1998 0.4139 MQIVGGHHSEIWTLDVDPAERYLVTGSADKELRFYTIKQDSVDRESINDGGYSSVSNKWDVLTHFGEIQRQNKDRVATVQFNKSGNLLACHVAGKMVEIFCVLDDAEAKRKAKRRVKRKKEKKHGKKATEGAEHGGESNENKGDNSTLTDGPIETREFIRFSCGGEVAGDFVVLSAGDSPTTSNTSCLSRTSPSQLLLEHKFTLWCLCSLISLKKTFPKLHYRGTFGHVYIGFNSESGEMCAMKEVTMFSDDAKSMESAKQLMQEIHLLSRLRHPNIVQYYGSEKVDNKLYIYLEYVSGGSIHKLLQEYGQFGELAIHSYTQQILSGLAYLHAKNTLHRDIKGENILVDPNGRVKVADFDVAKHITGQYCPVSFKGSPYWMAPEVIKNSKECSLGVDIWSLRCTVLEMATTKPPWSQYEGVAAMFKIGNSKELSTIPEHLSNEGKDFVRKCLQRNPRDRPSASELLDHPYVKGVAPLERPIMVPEASDPISGITHGTKAQGIGQGRNLSALDTDKLLIHSSRVLKSNPNESENHIQRNISCPVSPIGSPLLRSRSPHQRSDSLSPSPISSHQAASGASAPLTGGGSGAIPFSNHLKQSIYFPECLGSIPKSSNYTHTNSKPFITIRTPPNEYHEPLHPQIQHVLLQHQTQRVLRKFTKSRCTKMA* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2175 665 Pfam Protein kinase domain 223 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2175 665 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 222 610 - -
Psa5g2175 665 MobiDBLite consensus disorder prediction 112 149 - -
Psa5g2175 665 ProSiteProfiles Trp-Asp (WD) repeats profile. 4 45 IPR001680 GO:0005515
Psa5g2175 665 SUPERFAMILY Protein kinase-like (PK-like) 223 472 IPR011009 -
Psa5g2175 665 MobiDBLite consensus disorder prediction 126 140 - -
Psa5g2175 665 Coils Coil 103 123 - -
Psa5g2175 665 ProSiteProfiles Protein kinase domain profile. 215 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2175 665 Gene3D - 1 151 IPR015943 GO:0005515
Psa5g2175 665 MobiDBLite consensus disorder prediction 552 581 - -
Psa5g2175 665 Gene3D Transferase(Phosphotransferase) domain 1 218 488 - -
Psa5g2175 665 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 222 610 - -
Psa5g2175 665 MobiDBLite consensus disorder prediction 524 543 - -
Psa5g2175 665 MobiDBLite consensus disorder prediction 552 579 - -
Psa5g2175 665 SUPERFAMILY WD40 repeat-like 5 102 IPR036322 GO:0005515
Psa5g2175 665 SMART serkin_6 217 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2175 Psa-Chr5 169990428 169993658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2175 224 601 MAP Kinase Kinase Kinase AT1G63700 67.989 4.49e-174 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa5g2175 Pkinase 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2175 K20717 - gmx:100797994 659.062