Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2079 ATGACATCTTCAACAGTCGATACCTGCAAATTCAACGATTTGCAGGTTGACATTGAGAAGAACATGCCACAGGATGTGAGGTCTCAGTGGATTCTTAATGCTCCTGAGCCTCCAAGTCCTTGGCATGTGGCTGCAGATTCTGTGAGGAAAACTGTTTCTAACTTTAGAGACAAAGTTTCCTCTCTAAATCATCGATCTTGCGGTACAGTCCTACTTTCGGCTTTGCAGGTTGTTTTTCCTATTCTTGTTTGGGGCAGAAGCTACACTGCTGCTAAATTTCGGAAAGATTTTCTTGCTGGACTCACCATTGCTAGTCTATGTATTCCTCAGAGCATAGGGTATGCAACATTAGCAAACCTTGCTCCTCAATATGGACTATATACGAGCGTTGTACCGCCGCTGATCTATGCTGTAATGGGAACTTCGCGCGAGATCGCAATTGGTCCTGTCGCAGTGGTTTCCTTGTTGTTATCATCAATGGTACAGAAACTTGTAGACCCTTTTACTGATCCAGTTGGTTACACAAAGCTTATTTTTCTTGCAACTCTCTTTGCTGGAATCTTTCAAACTTCATTTGGACTATTCAGGTTGGGGTTCCTTGTGGATTTTCTGTCACATGCTGCCATTGTTGGATTTGTAGCAGGAGCTGCAATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATCACTCATTTTACAACCAAAACAGACATAATCTCTGTCTTGAAAGCTGTTTGGGAAGCATTTCATAATCCTTGGAACCCTCATAATTTTATCCTTGGAGGATCTTTCTTGGTGTTCATCCTAACAACTAGATTTCTGGGTAAAAGGAAGAAGAATCTGTTCTGGTTGGCATCAATTGCACCACTTGTATCTATTATAATCTCAACTCTAGCTGTTTATCTAACTCGAGCGGATAAAAATGGCGTAAAAATTGTGAAACATGTCAAAGCAGGACTCAATCCAATCTCCATCAATCAGTTAGACTTTAACAGTCCACATGTTGTCGATGTTGCCAAGATCGGACTGGTTGTCGCTGTCGTTGCTCTTACGGAATCTGTTGCTGTTGGACGATCTTTTGCGTCGATCAAAGGATACCAGCTCGACGGAAACAAAGAGATGATGTCAATAGGCTTCACAAACATCATAGGATCTCTCACCTCATGTTATGTTGCAACTGGTTCATTCTCTCGAACCGCGGTTAATTATGCTGCAGGATGTGAAAGTTTAATATCAAACATTGTGATGGCAATTACAGTGATGATATCACTACAGTTTTTGACAAACCTATTGTATTATACACCAATTGCTATCATTGCATCAGTTATCCTCTCTGCTCTACCAGGACTCATAGACATAACTGAAGCATACAAAATTTGGAAAGTTGATAAACTCGACTTTCTTGCTTGCATTGGTGCCTTCTTCGGTGTACTCTTTGCTTCCGTCGAGATTGGTCTTCTAGTCGCGGTGGTAATATCTTTTACAAAGATACTTCTGATTTCGATTCGACCAAGCACAGAAACATTAGGAAAACTTCCAGGAACTGATTTGTTCTGTGATGTCGATCAGTATCCTATGGCGATTCAGATTCCAGGTGTTATCATAATTCGTATGAAATCCGCGTTGCTTTGCTTCGCGAATGCCAATTTCGTTAAAGAAAGAATCATGAAATGGGTGACTCATGAAGAATCAGAAGACAACAAGGGAAATTCAAAGAGTGCAATTCAACTAGTAATTCTTGAAACCTCGAATTTGGTGAACATTGACACTTCTGGAATTGCTTCTCTGGAGGAACTGTACAAGAGCTTGTCTTCACAAGGGAAACAGTTGGCGATCGTGAATCCGAGATGGCAAGTTATACACAAGCTGAAGGTGTCGAAATTTGTGGACAAAATAGGTGGGAGAGTTTATCTGACTGTTGAAGAAGCTATTGTTGCAGGCTGCAAGAGTAATCAGTTCTGA 1968 0.4116 MTSSTVDTCKFNDLQVDIEKNMPQDVRSQWILNAPEPPSPWHVAADSVRKTVSNFRDKVSSLNHRSCGTVLLSALQVVFPILVWGRSYTAAKFRKDFLAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLVDPFTDPVGYTKLIFLATLFAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVLKAVWEAFHNPWNPHNFILGGSFLVFILTTRFLGKRKKNLFWLASIAPLVSIIISTLAVYLTRADKNGVKIVKHVKAGLNPISINQLDFNSPHVVDVAKIGLVVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAITVMISLQFLTNLLYYTPIAIIASVILSALPGLIDITEAYKIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVVISFTKILLISIRPSTETLGKLPGTDLFCDVDQYPMAIQIPGVIIIRMKSALLCFANANFVKERIMKWVTHEESEDNKGNSKSAIQLVILETSNLVNIDTSGIASLEELYKSLSSQGKQLAIVNPRWQVIHKLKVSKFVDKIGGRVYLTVEEAIVAGCKSNQF* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2079 655 PANTHER SULFATE TRANSPORTER 26 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa5g2079 655 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Psa5g2079 655 TIGRFAM sulP: sulfate permease 80 637 IPR001902 GO:0015301|GO:0016020|GO:0055085
Psa5g2079 655 Pfam STAS domain 526 645 IPR002645 -
Psa5g2079 655 SUPERFAMILY SpoIIaa-like 530 646 IPR036513 -
Psa5g2079 655 Gene3D STAS domain 505 651 IPR036513 -
Psa5g2079 655 PANTHER SULFATE TRANSPORTER 2.2 26 651 IPR030315 GO:0008272|GO:0015116
Psa5g2079 655 ProSiteProfiles STAS domain profile. 545 649 IPR002645 -
Psa5g2079 655 CDD STAS_SulP_like_sulfate_transporter 526 635 - -
Psa5g2079 655 Pfam Sulfate permease family 93 473 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2079 Psa-Chr5 161122568 161127276 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2079 24 648 Inorganic Solute Cotransporters AT5G10180 67.732 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2079 K17469 - gmx:100781327 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2079 5 161122568 161127276 Psa5g2079 5 161122568 161127276 ECH