Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2024 ATGGCCGAACGTGTGTTACTCACTCCTTCACTCCCTTTACCATCTCGACCTTCAGTTTCACCAACCACAATGGCTACTGTTACTGGCGGCGCCGCCGCTCGTATCATCCCCTCCGCTACCAGAGCCACCGTATCACTCTCCTCTTCTTCTCGTTCCTTTTTCTCATTTTCATCCTCTTCTACTTCCGTTTCTTCTCTCAAATGCTTGCGGTCATCGCCTCGCATTTCTCATCTATTTCTCGATCAGCGAAGATCAGAGGTTCGTGTTTCGAGTGGACGGTTCGGAACGGTTTCCGCCTTGGCGTCTGATCCTGATCAATTGAAGAGCGCTAGAGAAGATATCAAGGAGCTTCTCAGTACTAAATTCTGTCACCCTCTTCTGATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAAGAGTGGCCACAGAGAGGTGGAGCCAATGGTAGCTTAAGATTTGAAGCTGAGTTGAAACATGGAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTCCAGCCGATCAAAGACAAGTATTCAGGCGTGACATATGCAGACTTATTTCAGTTAGCTGGTGCTACAGCTGTGGAGGAAGCCGGAGGCCCAAAAATTCCCATGAAATATGGAAGAGTAGATACCTCTGGACCTGAGCAATGTCCTGAAGAAGGACGACTTCCTGATGCAGGCCCCCCTTCACCTGCTGATCATTTGCGGGAAGTTTTTTACCGAATGGGATTGGATGACAAGGAAATTGTTGCACTATCTGGCGCACACACACTGGGGCGGTCTAGACCAGACCGTAGTGGCTGGGGAAAACCTGAGACTAAATACACGAAAGATGGGCCAGGAGCACCTGGAGGACAATCCTGGACCGCACAATGGTTAAAGTTTGACAATTCTTACTTCAAGGACATCAAAGAAAAAAGGGATGAAGATCTATTGGTTTTGCCAACTGATGCAGCTCTTTTTGAAGATCCTTCCTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGAATTGTGATAGATGGTTCTCCAAATGTTAAGGGAGAGAAGTTTGTAGCAGCCAAGTACTCCTCTGGAAAGGAGTAA 1182 0.4645 MAERVLLTPSLPLPSRPSVSPTTMATVTGGAAARIIPSATRATVSLSSSSRSFFSFSSSSTSVSSLKCLRSSPRISHLFLDQRRSEVRVSSGRFGTVSALASDPDQLKSAREDIKELLSTKFCHPLLIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEAELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDTSGPEQCPEEGRLPDAGPPSPADHLREVFYRMGLDDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKRDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGSPNVKGEKFVAAKYSSGKE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2024 393 ProSiteProfiles Plant heme peroxidase family profile. 127 381 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 PRINTS Haem peroxidase superfamily signature 124 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 PRINTS Haem peroxidase superfamily signature 186 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 PRINTS Haem peroxidase superfamily signature 204 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 PRINTS Haem peroxidase superfamily signature 294 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 SUPERFAMILY Heme-dependent peroxidases 104 363 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 Pfam Peroxidase 111 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 ProSitePatterns Peroxidases proximal heme-ligand signature. 254 264 IPR019793 -
Psa5g2024 393 Gene3D Peroxidase, domain 2 232 355 - -
Psa5g2024 393 MobiDBLite consensus disorder prediction 217 237 - -
Psa5g2024 393 PRINTS Plant ascorbate peroxidase signature 103 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 PRINTS Plant ascorbate peroxidase signature 124 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 PRINTS Plant ascorbate peroxidase signature 185 203 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 PRINTS Plant ascorbate peroxidase signature 204 216 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 PRINTS Plant ascorbate peroxidase signature 323 347 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g2024 393 CDD ascorbate_peroxidase 96 365 - -
Psa5g2024 393 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 25 377 - -
Psa5g2024 393 Gene3D - 110 363 - -
Psa5g2024 393 MobiDBLite consensus disorder prediction 261 290 - -
Psa5g2024 393 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 25 377 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2024 Psa-Chr5 156280354 156288271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2024 127 360 Peroxidase AT2G22420 28.244 1.12e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2024 K00434 - gmx:100802238 646.736