Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2016 ATGCACCCACTTATACTATTCAAAAGCTACTACCAGATTATTACATTCCACCTCTCTCTTTCTCTCTCTCTCCCAATATATATACATACTTCAATTAAGAGTATTCTTAATTATAAGATTGATATGGAGGTTCTGGATAGCAGAAAACTACAGTTACAACAACCACACAACTTGAAGGAAGAGCAACATTTTCATGTCTTGGCGGTAGATGATAGTGTGATTGATAGGAAGCTTCTAGAGAGACTCCTCAGAGATTCTTCATGCAAAGTTACATGTGTGGATTCTGGAGACAAGGCTTTGAAATATCTTGGACTCAATATTGATGATGTTGATACAAATGATTCTTCTTCCACTGAGGCGATATTGGAATCATCTTCTCCTCCTCCTCCTCTACCATTGCAGCTTCAAGAGGGAATTGGCAAAGTGAATTTGATCATGACAGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAAAGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTTGTGATCATGTCTTCAGAAAATGTACCTTCCAGAATTACCATGTGCTTGGAAGAAGGTGCAGAAGAGTTTCTGTTGAAGCCTCTTCAGATATCAGATTTGCAGAAGCTTCAGCCTTATTTTCCTAAATCTCTTGATAATTCTTCGGATGAACAAGAATCTACTAACAGTACTTCTATAGATTCTTCTGACAATGAAGATGTGATCAACAATAATAACAGTAATGGGATTAGCAAAAGGAAGGCCATGTCTCCTGAGCCTCCGGAGAGATCAAAGCCAAAAATGAAAGGGTTAACGGTGGTGGTGTAA 825 0.3855 MHPLILFKSYYQIITFHLSLSLSLPIYIHTSIKSILNYKIDMEVLDSRKLQLQQPHNLKEEQHFHVLAVDDSVIDRKLLERLLRDSSCKVTCVDSGDKALKYLGLNIDDVDTNDSSSTEAILESSSPPPPLPLQLQEGIGKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRITMCLEEGAEEFLLKPLQISDLQKLQPYFPKSLDNSSDEQESTNSTSIDSSDNEDVINNNNSNGISKRKAMSPEPPERSKPKMKGLTVVV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2016 274 Gene3D - 65 243 - -
Psa5g2016 274 PANTHER TWO-COMPONENT RESPONSE REGULATOR 51 272 IPR045279 GO:0009736
Psa5g2016 274 CDD REC_typeA_ARR 66 209 - -
Psa5g2016 274 Pfam Response regulator receiver domain 141 208 IPR001789 GO:0000160
Psa5g2016 274 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 51 272 - -
Psa5g2016 274 ProSiteProfiles Response regulatory domain profile. 65 214 IPR001789 GO:0000160
Psa5g2016 274 SUPERFAMILY CheY-like 64 208 IPR011006 -
Psa5g2016 274 MobiDBLite consensus disorder prediction 217 252 - -
Psa5g2016 274 SMART REC_2 64 210 IPR001789 GO:0000160
Psa5g2016 274 MobiDBLite consensus disorder prediction 217 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2016 Psa-Chr5 155739323 155742026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2016 57 229 Response Regulator Gene Family AT3G57040 55.429 6.37e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa5g2016 Response_reg 9.2e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2016 K14492 - gmx:100786187 297.745