Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1894 ATGGGAAAGTGGTGGTTTGTTGGTGTATTGATTGTTTTGGGTTATGTATGCTTATTGGGCACTACTTTTAGGGTAGAAGGATACCCCATTGAAGATTTGGTTGAGAGGTTACCAGGGCAACCCAAGGTTAAATTTAGTCAATATGCTGGCTATGTTGATATTGATCTCAAACATGGGAGGAGTCTCTTCTACTATTTTGTTGAGGCTGATCATCACCCTCACAAAAAACCTCTCACCCTTTGGCTCAATGGAGGTCCGGGATGTTCCTCCATTGGAGGAGGTGCTTTTACTGAGTTAGGGCCATTTTATCCTAAGGGTGATGGACGCGGTTTAAGTAGGAATTCAAAATCTTGGAACAAAGTTTCGAATCTTCTGTTTGTGGAGTCTCCTGCTGGAGTTGGCTGGTCATACTCAAATACAACTTCTGATTATACCATTGGTGATGATGCTACAGGACATTACATACCCCAGCTAGCTAATGCTATTCTTGATTATAATGCTTATCATTCATCTGATTTCAAATTCAATATAAAAGGACTCGCGATTGGAAACCCGCTTTTGAAATGGAATCATGATAGACGAACAACATATGAATATTTTTGGTCACACGGAATGATTTCAGATGAAATTGGAGTTGCAATCATGAATGATTGCGACTTTGATGATTATAATTATGGAGATCATCAAAATTTATCCGATTCATGCAACGATGCCATAGAAGATGCTAATAAAGTTGTGGGCGAGTATATAAACATATATGATGTGATTCTTGATGTTTGTTATCCTGCCATAGCTGAACAAGAATTGAGATTGAAAAAAATGATACATAATATAAGTTTAAACGGAGATGTTTGTATTGACTCTGAAACCAAATTCTACCTTAACCTCCCTGAAGTTCAGAAGGCTCTTCACGCTAATCGTACCAATTTGTTGTATCCGTGGTCCGATTGTAGTAATGTTTTAAATTACAGTAAAACAGATCCTGACATTAGCATGCTTCCAATTCTGAAACGGATAATTCGAAACCATATTCCAGTATTGGTTTTCAGTGGAGATCAAGATACAGTTATACCATTAATAGGTAGTCGCACACTCGTTCGTGAACTAGCTGATGACCTAAAATTCAAGATTACTGATCCATATAGGGTTTGGTTTCACAAAGGACAGGTTGGAGGTTGGGTAACTGAGTATGGAAAACTGTTAACTTTTGCGACTGTAAGAGGAGCTGGTCACATGGTACCATATGCACAACCTTCAAGAGCATTGCGTTTATTTCAATCCTTTTTGAGTGGGAGGAGATTGCCAAACACTACTAGACCTTCAATTGATGAATCAATAATAACATATGGAAATAAAAAATTCTATAGTAGAATTGATTCTTATTAA 1386 0.3759 MGKWWFVGVLIVLGYVCLLGTTFRVEGYPIEDLVERLPGQPKVKFSQYAGYVDIDLKHGRSLFYYFVEADHHPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLSRNSKSWNKVSNLLFVESPAGVGWSYSNTTSDYTIGDDATGHYIPQLANAILDYNAYHSSDFKFNIKGLAIGNPLLKWNHDRRTTYEYFWSHGMISDEIGVAIMNDCDFDDYNYGDHQNLSDSCNDAIEDANKVVGEYINIYDVILDVCYPAIAEQELRLKKMIHNISLNGDVCIDSETKFYLNLPEVQKALHANRTNLLYPWSDCSNVLNYSKTDPDISMLPILKRIIRNHIPVLVFSGDQDTVIPLIGSRTLVRELADDLKFKITDPYRVWFHKGQVGGWVTEYGKLLTFATVRGAGHMVPYAQPSRALRLFQSFLSGRRLPNTTRPSIDESIITYGNKKFYSRIDSY* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1894 461 PANTHER CARBOXYPEPTIDASE 151 439 - -
Psa5g1894 461 PANTHER CARBOXYPEPTIDASE 6 151 - -
Psa5g1894 461 Gene3D alpha/beta hydrolase 149 271 IPR029058 -
Psa5g1894 461 Gene3D alpha/beta hydrolase 30 148 IPR029058 -
Psa5g1894 461 Pfam Serine carboxypeptidase 151 431 IPR001563 GO:0004185|GO:0006508
Psa5g1894 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Psa5g1894 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Psa5g1894 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 401 414 IPR001563 GO:0004185|GO:0006508
Psa5g1894 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 151 IPR001563 GO:0004185|GO:0006508
Psa5g1894 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 151 439 IPR001563 GO:0004185|GO:0006508
Psa5g1894 461 SUPERFAMILY alpha/beta-Hydrolases 32 434 IPR029058 -
Psa5g1894 461 ProSitePatterns Serine carboxypeptidases, histidine active site. 401 418 IPR033124 GO:0004185
Psa5g1894 461 Gene3D - 332 431 - -
Psa5g1894 461 Gene3D - 285 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1894 Psa-Chr5 146317450 146319864 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1894 290 434 Calmodulin-binding Proteins AT2G22960 28.966 2.84e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1894 K16297 - gmx:100803335 690.649