Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1876 ATGGGGAACGTTACAGTTCCTTTTGTAGGGATGGTAATTGCAGAGTGTGTTCAAGTTGCGTTAATCATCTTGAGCAAACAAGTCATGGCTCAAGGAATGACCAGTTTCATTTTCATTTTCTACTCCAATTCCATCGCTGCCATCGTCCTTCTTCCATCTTCCTTCTACATCCACAGATTTCAACGTCCTCCAATCACGTTTTCCACCCTTTCTGGATTCTTCATACTTGGACTACTTGGGTTTTTGGCGCAGGCTTTTGGATATGCTGGGATTTACTACAGCTCATCAACACTTGCTACTGCCATGCTCAATCTTATTCCTGGTTTTACCTTCATACTTGCCGTTCTTTTTAGAATGGAGCAATTGGATTGGAGAAGCTATAGCAGCCTAGCAAAATCATTGGGAACAATAGTATCAATTGCCGGTGCTTTTATTGCGACTTTGTACAAGGGTGCTGCACTTCTGAAGGGACCGTCACCCGCAAACTTATCTCAGCAGCTAGATTTCTCGCAGGACACTAGTTGGATAATCGGAGGATCATTTCTTGCAGCTGATTGTGTGGTGGCTTCAGCATTTCTGATAGTGCAGGCTTCTATTCTTAAGAAATATCCAGCAGGGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCTATCTGCCGTGACCTGTTTGGTTGTGGAAAGAGACATCAATGCTTGGAGCTTGAAACCCAAGCTACGGTTGCTATCAGTTTTATACTCGGGAGTGTTTGGCTCTGCATTTCAAGTTGGTGTGACTACTTGGTGTTTGCACCAGACAGGACCTGTTTTTGTTTCCATGTTTAAGCCTATAGGAATTGTCATATCGGTGGTTATAGGCGTTGTCTTCCTTGGTGATGCATTCTATCTCGGAAGTTTGATTGGTGCTACTGTGATTGTTATTGGGTTTTATTCTGTGTTGTGGGGGAAATCCAAAGATATTGACGCGATAAGCTTGGAATCAAGAGGCAACCATACCCCTCTTTTGAAAGAAAACAACAGTGAAGACGTATAA 1038 0.4258 MGNVTVPFVGMVIAECVQVALIILSKQVMAQGMTSFIFIFYSNSIAAIVLLPSSFYIHRFQRPPITFSTLSGFFILGLLGFLAQAFGYAGIYYSSSTLATAMLNLIPGFTFILAVLFRMEQLDWRSYSSLAKSLGTIVSIAGAFIATLYKGAALLKGPSPANLSQQLDFSQDTSWIIGGSFLAADCVVASAFLIVQASILKKYPAGLIVVFFYCFFVAILSAVTCLVVERDINAWSLKPKLRLLSVLYSGVFGSAFQVGVTTWCLHQTGPVFVSMFKPIGIVISVVIGVVFLGDAFYLGSLIGATVIVIGFYSVLWGKSKDIDAISLESRGNHTPLLKENNSEDV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1876 345 PANTHER WAT1-RELATED PROTEIN 8 326 IPR030184 GO:0016021|GO:0022857
Psa5g1876 345 PANTHER WAT1-RELATED PROTEIN 8 326 - -
Psa5g1876 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 147 - -
Psa5g1876 345 Pfam EamA-like transporter family 13 144 IPR000620 GO:0016020|GO:0016021
Psa5g1876 345 Pfam EamA-like transporter family 182 315 IPR000620 GO:0016020|GO:0016021
Psa5g1876 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1876 Psa-Chr5 144408590 144410905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1876 6 345 Nodulin-like Gene Family AT3G28050 44.898 1.90e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1876 - - gmx:100804932 514.998