Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1875 ATGGAGGGTGAGATTAGGACTTCAGAATTGATACCATTCATAGTGATGGTGATTATGGAAGGGTGCACTATAGGACTAACTATATTTGCAAAAACTGCAATAACAAATGGAATGAGTCCATTTGTGTTCATTGTTTATACCAATGCTTTGGCCACTATAGTTTTGTTTCCTTCTTCCTTTTTATTAAACCACCAAAACAGAAAGGAGAAGCCACTTTTTACTTTCTCTTTGTTTAAAAGATTCTTGCTTATGGGTTTCACAGGAATAACTATGACTCAGACACTTTTATTTTTGGGTCTAAGTTACAGTTCTCCAATACTTGTATGTGCCATGAGCCACTTGATCCCAACCTTTACTTTTCTCCTTAATATCATTCACAGGAAGGTGGAGTTGAATTTGAAAAACTCTGGTATGCAAGTTCAAATAATTGGTATAATAGTGTCATTAATGGGAGCAATAGTAGCTGAATTCTTCAAAGGGCCACTCATAAGACCCTCTTCTCACCACCTTAGATATACTAAGCAACTTTTTGTCTTTTCCTCAACACCTGAATTTTGGGTTTTTGGTGGCATTTTGCTTGCTGCTGCTTCTTTCTCAGTTTCAATTACCAACTTTATTCAGAAAGAAACTGTTAAGCAATATCAAGAACCAATGAAGATGGTTTCTTATTATACCTTGCTAGGGACAGTTCTTAGTGCAATAGTCTCATGCATATTTGAGAGTGATGTAAATTCTTGGAAGCTAAAGCATAACATGGAGCTTATTCTCGTTGTTGTAACGGGCATATTTGGGGGTGTGATTCGTCCAAATATTCAAATTTGGTTGAGTAGAATGAAGGGTTCACTTTATGTGCCACAGTTCAAGCCTTTTGGTATTGCTTTTGCTACCACTTTTGGAGTTTGCTTCTTTCCTAATAGTCTTCATTATGGAAGTGTGATAGGAGCAAGTGTGATTGGAATGGGGTATTATACGATATTATATGGAGAATTCAAAGGAGATGAAGATGAGAAAAGTAGTGAGGAAAGCTCAGATTCTTTGGACAAGAAGATTCCTCTTTTGCAAGAAAATATGCAAGTGTAA 1080 0.3639 MEGEIRTSELIPFIVMVIMEGCTIGLTIFAKTAITNGMSPFVFIVYTNALATIVLFPSSFLLNHQNRKEKPLFTFSLFKRFLLMGFTGITMTQTLLFLGLSYSSPILVCAMSHLIPTFTFLLNIIHRKVELNLKNSGMQVQIIGIIVSLMGAIVAEFFKGPLIRPSSHHLRYTKQLFVFSSTPEFWVFGGILLAAASFSVSITNFIQKETVKQYQEPMKMVSYYTLLGTVLSAIVSCIFESDVNSWKLKHNMELILVVVTGIFGGVIRPNIQIWLSRMKGSLYVPQFKPFGIAFATTFGVCFFPNSLHYGSVIGASVIGMGYYTILYGEFKGDEDEKSSEESSDSLDKKIPLLQENMQV* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1875 359 PANTHER WAT1-RELATED PROTEIN 8 356 - -
Psa5g1875 359 MobiDBLite consensus disorder prediction 335 359 - -
Psa5g1875 359 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020|GO:0016021
Psa5g1875 359 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020|GO:0016021
Psa5g1875 359 PANTHER WAT1-RELATED PROTEIN 8 356 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1875 Psa-Chr5 144373887 144376725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1875 1 353 Nodulin-like Gene Family AT1G70260 47.411 7.11e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1875 - - gmx:100803495 536.184