Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1851 ATGATGGAGTGCAACAAGGATGAAGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATATTGGTGCAAAGAAGTTTGCTATTAAGGCTCAAAATTTGTATCCTGATTTGGAGGATGTTCCCCAGTTTTTGACTACTATTGATATTTATATATCTGCTGAGAACAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAAGAGACTGTTAGAAAGCAGTACAGGAAGTTAGCTCTAACCCTTCATCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACAAAGAGATTAGAATATAACCAGAAGAGGAGTTTGAAAGGCTTCCAACATAATACTCCCAACCGTGGGCATCCATCAGCAGCGCCTAGTTCAAATAGTTATTATCATTTTAAGAAGAATGCATCTTCAAATGCGAGGACTGGGAATACTAACGTGAGGGCGCCTGCAACTTCTGTTCCTCCTCCTCAGAAAAAGGCTGAAACCTTTTGGACTATCTGTAACCGGTGTAGGACACATTATGAATATCTCAGAGTTTATTTGAATCACACCCTTTTATGTCCCAACTGTAATGAAGCTTTTGTGGCTGTAGAGAGGGGTCCTCCTCCCAATGTTTTTAAGCCATCAAGTTTGCCCTCCTCCCATCAGCAGCACCAGAATTCTCGACGTCATCCTGGAAGTAACAATTCAAACCATCTGTGGGGTTCCCACTCCAGAATGGCTGGTTTTGGTAGCACAGATGGATCATCATCTGTTGCTGCCCAAGCTGCAAGTGTTGTGCAGAAGGCAAGTGAGAAAGTGAAGAGAGAAGGAGCACCGTCAATTGCTGAATGGGAGAGGATTCAAATGTCTAAGAGGGCTGATGGTTCTATGAAGAAAAGGAGGACAGATGATATGCGCGCTAATGGTCATCCAGGATATATGGCAAATCATATGGCTATGGGACATGGAGCAGCAGCAGGTTTAGGCAGTTTCTCTGAACCAGGAAAGGTTAACATGGAAAAAGAAAAGATTTATGGTTTTTCAGGTCTCGCAAGCAAGCATTACAGCACGCGAGAGTTGTCAATGTATGAGTTACGAAATATGTTGGTAGATAAGGCACGGATTGAAATTCGTAAGAAACTTGAAGAATGGAAGTTAAGGGCTGAAGCTAGGATTATCAACAAGAACAAAGAGAACAAGAGACACAAAAATATGCCTAATGACAAAACAACCGGTTCAGAGAAGTATAGAGAGTCCAATGTTAATGGTAATAAGCATGTTGGTATTGATTCTTTACCTGTCACATCTGATGATACAGTTAAGAGCCAAGCCTATGTTACAATCAATGTTCCGGATCCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAGTTCCTTTGCAGAGGATCAGGTCTGGGCTGCTTATGATGATGATGATGGAATGCCTAGATACTATGCTAGAATTCACAAGGTGATCTCCATAAAGCCATTTAGAATGCGAATCAGTTGGCTTAACTCTCGAAACAACACTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGAACTGGAAAGCATGAAGTAACCGAATCATTAAATTCATTTTCACACAAGGTTAGGTGGACAAAAGGCAACAGAGGAGTTGTGCGCATCTTTCCAGGTAGGGGAGAAGTCTGGGCACTTTATAGAAACTGGTCTCCTGATTGGAATGAACATACTCCTGATGAAGTGATTCATAAGTATGACATGGTAGAGGTACTTGATGATTTCAGTGAAGAGCAAGGAATATCAGTTACTCCCCTTGTTAAGTTTCCAGGCTTTAGGACAGTATTTCGAAGGCACCAGGACCAGAATGAGGTTAGGAGGATTCCTAAAGAGGAGATGTTCCGATTCTCTCATCAGGTTCCTAATCACTTGCTCAGTGGTCAAGAGGCTCATAATGCTCCAATAGGCTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTCCTTCAGATAGAAACGGAAGCTAATGAGACAGCAGGTAATGTTAAGAAACCCTGA 2136 0.4195 MMECNKDEAVRAKEIAERKFSEREYIGAKKFAIKAQNLYPDLEDVPQFLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNTPNRGHPSAAPSSNSYYHFKKNASSNARTGNTNVRAPATSVPPPQKKAETFWTICNRCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPSSLPSSHQQHQNSRRHPGSNNSNHLWGSHSRMAGFGSTDGSSSVAAQAASVVQKASEKVKREGAPSIAEWERIQMSKRADGSMKKRRTDDMRANGHPGYMANHMAMGHGAAAGLGSFSEPGKVNMEKEKIYGFSGLASKHYSTRELSMYELRNMLVDKARIEIRKKLEEWKLRAEARIINKNKENKRHKNMPNDKTTGSEKYRESNVNGNKHVGIDSLPVTSDDTVKSQAYVTINVPDPDFHNFDLDRAESSFAEDQVWAAYDDDDGMPRYYARIHKVISIKPFRMRISWLNSRNNTELGPIDWVGSGFYKTCGDFRTGKHEVTESLNSFSHKVRWTKGNRGVVRIFPGRGEVWALYRNWSPDWNEHTPDEVIHKYDMVEVLDDFSEEQGISVTPLVKFPGFRTVFRRHQDQNEVRRIPKEEMFRFSHQVPNHLLSGQEAHNAPIGCRELDPAATPLDLLQIETEANETAGNVKKP* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1851 711 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Psa5g1851 711 PANTHER BNAC03G44070D PROTEIN 2 704 - -
Psa5g1851 711 Pfam DnaJ domain 67 128 IPR001623 -
Psa5g1851 711 MobiDBLite consensus disorder prediction 236 256 - -
Psa5g1851 711 MobiDBLite consensus disorder prediction 132 178 - -
Psa5g1851 711 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Psa5g1851 711 Gene3D DnaJ domain 64 174 IPR036869 -
Psa5g1851 711 SMART dnaj_3 66 123 IPR001623 -
Psa5g1851 711 SUPERFAMILY Chaperone J-domain 59 127 IPR036869 -
Psa5g1851 711 CDD DnaJ 67 120 IPR001623 -
Psa5g1851 711 PANTHER HEAT SHOCK PROTEIN-LIKE 2 704 - -
Psa5g1851 711 Pfam Domain of unknown function (DUF3444) 468 674 IPR024593 -
Psa5g1851 711 MobiDBLite consensus disorder prediction 132 184 - -
Psa5g1851 711 PRINTS DnaJ domain signature 69 87 IPR001623 -
Psa5g1851 711 PRINTS DnaJ domain signature 87 102 IPR001623 -
Psa5g1851 711 PRINTS DnaJ domain signature 103 123 IPR001623 -
Psa5g1851 711 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1851 Psa-Chr5 141931954 141936836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1851 5 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.189 9.65e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1851 - - mtr:MTR_3g091040 1263.06