Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1824 ATGGCACTGTATATAACTGGGCCATATCCAATTCTGGAAAGTAATAGCCTAGCTTATTCGCATAGGAATTTGTCAACAAAACTTGTTTTACCTGTTCCCCTGCATTTCGCTAGACATAGAAAATCATTTAATGAAGGCAAGAGAAAGCACAAAGGAGTATGCAGTTCATCACTAAATGGAGCTGCATCTGCTTCTTCCATGGAGTCACATGAAGAGGATCTCAGTACCTTTTCCGTTTGCTTGGAGGAAGAAACTGATCATGTTGTAAGGTTCAAAATGTCGGATTTTAAGGTTTTGGATCATGTTAGCATTGGCCTCGGTGGACGGGCAGATGAGGTGGTTTTTGAAGGGGAGGTGAAGGATAGTGGTAGCCCTTTGTATAACACAAGAGTTATACTTCGACAGCTTTATAGCACCCAAGCTCAGCGTCGAGGAAAACGAGCAATAGAGGTATTGAAGAAGCTGGTTCGCCGTAAACTTTTATATCATTCTTACTCAATGCAAGTTCTTGGCTATATCTCTTTGCCTGCAAGTGGTGGTAGTGGTTCATTCATCCTAGTCCATGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACAGTCAGATTGGCTTCAAACTTTAGAGGCCACTCTTGCACTCGACGAAGAGTCTGTTAGGAAGGTAGGAGAAGACACAACTGGAGGTCCTGCGATTTCTAGGCAATTGCGGCTTATTCGAATATTGATGAGAGATCTTCTAATTGGAGTAAATTACCTCCATAGTCATGGTCTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGACATATCAAAGTAGGTATTCTGGGAAATTCTGCTGACTTTTGCGAGGATGGTTCAAATAGTGGCTCTATGGAAAACATGGACAGGCGACAAATGATGATTGCATTTGACATGAGATGCATGGGTTTCATAATGGCAAAAATGGTAATGGGAGAACTTATGGATCCTTTGATCTTTGCAAAGTTCAAATCGTTCCTCACAAAGGGGAATGATCCTTCATGTTTGCGACAGCTTATGCTGGAAATCCTTGGTAGAAATTCTCCATATGGAAATGCTGGCTTACAAATGCTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCTTTATTGCTTGCAACCAAACCTTCTCAGAGGATAAGTTGTTTGGATGCTCTAAGGCACCCATTCCTTTGTGGGCCAAGATGGCGAGTGGTCCCATCAATGGAAATTATCAGATGGGGTCTGGGTTGTACTGCAATGCGTATTAGTGAGGAGTACATTTATCGCCAACCTCAGCGCAGTAGGCTTGCCCACTTCATTGACTTATTGGAGATGTTGAATCCTAATCCAAAGCCAAAGAATTGGCTGGAGCTGCTTCCTGGCAAATGGCGTCTATTGTACTGCACTGGGAAGCATGTTGGTCTGACTCTTCGACAACCTACAGTCCGTGTACTAGTTGGGGATTTGCATTTAACTGTTAAACGAGAATCGAAGTTGAAGTCGAACCTTTCCTTCGTCTCTGACATTGGATTCACAGTCATGATTGGTCAGGACTGGCCTCATGACAAAGCTGGTAAAAGAGGAAGAGTGCAGGTGAACTCTTCATTTACACTAAGAGCTGGGAGACGGTTATATCTGAAGCAAGACAGTACCTCAGAGAAGCTCTCCTTTGGCCCCTCCAGCAATGAGGAGGCTTTAGCTCAGAAATTTACTAGCAAGAAATGGAGAAAAATAACCCCTTTCAAGGAGTTTCCATCAAGTCTCCCTGCAGCCAAGCTGGCATCTGGTGATATTGATGTGACAATGAATCTTGATGATCCTTTAAATCAAAACATTGATACAGCAAAAAATGTTCTTCAAGAACTAAGGACACAAATTCCCCCTGAAATATTTGATCTGTCAAAGGTTGTGTGTGGAACTTATGTGGACTCAAGGCTGCTCGTTCTTCGAGGAGTTAATGGATCAGCTCTCCTATTTACAAGGTCTTTTGTGGATAGCAACAGTTCTAGCTAA 2040 0.4289 MALYITGPYPILESNSLAYSHRNLSTKLVLPVPLHFARHRKSFNEGKRKHKGVCSSSLNGAASASSMESHEEDLSTFSVCLEEETDHVVRFKMSDFKVLDHVSIGLGGRADEVVFEGEVKDSGSPLYNTRVILRQLYSTQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVLGYISLPASGGSGSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEESVRKVGEDTTGGPAISRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNSADFCEDGSNSGSMENMDRRQMMIAFDMRCMGFIMAKMVMGELMDPLIFAKFKSFLTKGNDPSCLRQLMLEILGRNSPYGNAGLQMLDRNWGAGWHLLSLLLATKPSQRISCLDALRHPFLCGPRWRVVPSMEIIRWGLGCTAMRISEEYIYRQPQRSRLAHFIDLLEMLNPNPKPKNWLELLPGKWRLLYCTGKHVGLTLRQPTVRVLVGDLHLTVKRESKLKSNLSFVSDIGFTVMIGQDWPHDKAGKRGRVQVNSSFTLRAGRRLYLKQDSTSEKLSFGPSSNEEALAQKFTSKKWRKITPFKEFPSSLPAAKLASGDIDVTMNLDDPLNQNIDTAKNVLQELRTQIPPEIFDLSKVVCGTYVDSRLLVLRGVNGSALLFTRSFVDSNSSS* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1824 679 ProSiteProfiles Protein kinase domain profile. 96 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1824 679 SUPERFAMILY Protein kinase-like (PK-like) 91 418 IPR011009 -
Psa5g1824 679 Gene3D Transferase(Phosphotransferase) domain 1 232 408 - -
Psa5g1824 679 SMART serkin_6 96 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1824 679 Pfam PAP_fibrillin 441 667 IPR006843 -
Psa5g1824 679 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 14, CHLOROPLASTIC-RELATED 75 672 - -
Psa5g1824 679 PANTHER CELL DIVISION PROTEIN KINASE 75 672 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Psa5g1824 PAP_fibrillin 1.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1824 - - ccaj:109796635 1128.24