Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1805 ATGGACTACGGCAGGCTAGGATTATCCGACCCTGGTGGTTCCACACCCTCCGAACCTATAATTCATCCCAAAGCAAGATCTTCTTCAAAGAAGAAAATCATTTTCCTCTCACTCCTCACTGTCTTGCTCATCGTTGCCTCGGCTGTTTCCGCTGCAATGCTCACTCGAATCCACTACCGCCGTGAAAACCAACCGAAAAATCCATCTCTTCGAAGTAATCCAACACAAGCGATCTCTCGAACATGTAGCAAAACTCGTTTCCCTTCGCTCTGCGAAACTTCTCTTCTTGATTACCCGGGATCCACAATCGCCACAGAGAAAGACCTCATCCACATTTCGCTCAACATGACGCTACAACATCTCTCCAAAGCTCTCTATTCCTCCGCCTCTATCTCCTCCACCGTCGGCATGAACCCTCGCATCCGCGCCGCTTACCAAGACTGTCTCGAACTTCTCGACGACTCCATCGACGCTCTCACTCGCGCATTAACCTCCGTCGTACCTTCCTCCTCCTCCAAAGGCGCCGCTAAGCCTCTTACCTCATCCTCCACCGACGATGTACTCACGTGGCTAAGCGCAGCACTTACCAACCAAGACACGTGCGCTGAGGGTTTTACCGACACTTCCGGTAACGTAAAAGATCAGATGGCGAATAACATAAAGGACTTGTCGGAGCTAGTGAGTAATTGTTTAGCCATTTTCTCTAACTCCGGCGCTGGAGATGATTTCGCCGGTGTTCCTATACATAATAAGAGACGGTTAATGACAATGCCAGAAAATGATTTTCCGATATGGTTGCGAAAACGAGAGAGAAGATTGTTGGGCTTGCCGGTGTCGGCGTTACAGGCTGATGTGATAGTTTCTAAAGATGGTAACGGAACGGTAAAAACCATATCGGAAGCTCTTAAGATGATACCTGAATACGGTAACCGACGCTTCATTATCTATATCAGACAAGGAAGGTATGAAGAAGACAATTTAAAGATTGGAAGGAAGAAGACTAATGTTATGATCATGGGGGACGGAAAGGGAAAGACAGTGATCACAGGGGGCAAAAATGTTATGCAAAACTTGACCACATTTCACACTGCTTCCTTTGCTGCTAGTGGTCCAGGTTTCATTGCAAGAGACATGACATTCGAGAACTACGCCGGGCCATCAAAGCACCAAGCGGTGGCCCTCCGTGTCGGATCAGACCACGCGGTGGTCTACCGATGCAACGTCATCGGATACCAAGACACAATGTATGCACATTCAAATCGTCAATTCTACCGCGAATGTGACATTTACGGTACCGTGGATTTCATATTCGGCAACGCTGCAGTTGTTTTCCAAAACTGCAGCCTCTACGCGCGAAAGCCCATGGCGCAACAGAAAAACACCATCACAGCTCAAAACAGAAAAGACCCGAATCAGAACACGGGTATATCCATCCACAACTGTAGAATCCTAGCCACACAAGATCTAGAAGCATCCAAGGGAAACTTCACAACATATCTGGGCCGTCCATGGAAACTATACTCTAGAACAGTGTACATGTTATCATACATGGGGGATCATTTAAATCCACGTGGGTGGTTAGAATGGAATACAACTTTTGCTTTAGACACCTTGTACTATGGTGAATACATGAATTATGGACCGGGTGGAGCTATTGGGCAACGGGTAAGTTGGCCTGGGTATCGGGTTATTACATCCACCGTGGAAGCTAATAGATTCACGGTGGCTCAGTTCATATCAGGCTCGACATGGTTGCCGTCTACGGGAGTGGCATATGTAGCTGGCTTAAACACCTAA 1797 0.4747 MDYGRLGLSDPGGSTPSEPIIHPKARSSSKKKIIFLSLLTVLLIVASAVSAAMLTRIHYRRENQPKNPSLRSNPTQAISRTCSKTRFPSLCETSLLDYPGSTIATEKDLIHISLNMTLQHLSKALYSSASISSTVGMNPRIRAAYQDCLELLDDSIDALTRALTSVVPSSSSKGAAKPLTSSSTDDVLTWLSAALTNQDTCAEGFTDTSGNVKDQMANNIKDLSELVSNCLAIFSNSGAGDDFAGVPIHNKRRLMTMPENDFPIWLRKRERRLLGLPVSALQADVIVSKDGNGTVKTISEALKMIPEYGNRRFIIYIRQGRYEEDNLKIGRKKTNVMIMGDGKGKTVITGGKNVMQNLTTFHTASFAASGPGFIARDMTFENYAGPSKHQAVALRVGSDHAVVYRCNVIGYQDTMYAHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHNCRILATQDLEASKGNFTTYLGRPWKLYSRTVYMLSYMGDHLNPRGWLEWNTTFALDTLYYGEYMNYGPGGAIGQRVSWPGYRVITSTVEANRFTVAQFISGSTWLPSTGVAYVAGLNT* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1805 598 CDD PMEI-like_3 82 236 - -
Psa5g1805 598 PANTHER PECTINESTERASE 23 596 - -
Psa5g1805 598 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 235 IPR035513 -
Psa5g1805 598 Pfam Plant invertase/pectin methylesterase inhibitor 77 233 IPR006501 GO:0004857
Psa5g1805 598 PANTHER PECTINESTERASE 23 596 - -
Psa5g1805 598 SMART PMEI_2 73 233 IPR006501 GO:0004857
Psa5g1805 598 TIGRFAM PME_inhib: pectinesterase inhibitor domain 64 235 IPR006501 GO:0004857
Psa5g1805 598 MobiDBLite consensus disorder prediction 1 21 - -
Psa5g1805 598 Pfam Pectinesterase 284 581 IPR000070 GO:0030599|GO:0042545
Psa5g1805 598 Gene3D - 278 596 IPR012334 -
Psa5g1805 598 ProSitePatterns Pectinesterase signature 2. 429 438 IPR033131 -
Psa5g1805 598 SUPERFAMILY Pectin lyase-like 279 595 IPR011050 -
Psa5g1805 598 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 236 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1805 Psa-Chr5 138954895 138959055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1805 1 597 Carbohydrate Esterase AT5G53370 62.957 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1805 - - gmx:100808236 880.937