Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1797 ATGTTTGAGAGATGCCAAGATGGACAAAAAAGCATCCATGATGTTGTTCTTGTTGGTGGTTCTACTAGAATTCCAAAGGTTAACAACTTTTGCAGGATTTCTTTAATGGAAAGGAGCTTATGCAAAAACATTAATCCCGATGAGGTTGTTGCATATGGAGCTGCTGTCCAGGCTGCAATTTTGAGTGGTGAGGGGAATGAGAAGGTGCAGGATCTTCTCCTTCTTGATGTTACCCCTCCTGGTACTGCATTGATGATGTTAGATGCTGGTAAAATGGTAGCCGCCGTCAGTTCTCGTAATGCTACTCTAGTTGGTGCTTTGACCAGGCTTCAGAGGTGTGCATTCAGTAGAAGCTGGGAGATCCAAATCATTGATGCCCAGGCTCTTATGACGGTATCAAACCAATGA 408 0.4387 MFERCQDGQKSIHDVVLVGGSTRIPKVNNFCRISLMERSLCKNINPDEVVAYGAAVQAAILSGEGNEKVQDLLLLDVTPPGTALMMLDAGKMVAAVSSRNATLVGALTRLQRCAFSRSWEIQIIDAQALMTVSNQ* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1797 135 Pfam Hsp70 protein 9 104 IPR013126 GO:0005524|GO:0140662
Psa5g1797 135 Gene3D - 45 59 - -
Psa5g1797 135 PANTHER HEAT SHOCK PROTEIN 70KDA 8 104 IPR013126 GO:0005524|GO:0140662
Psa5g1797 135 Gene3D - 9 44 - -
Psa5g1797 135 PRINTS 70kDa heat shock protein signature 12 28 - -
Psa5g1797 135 PRINTS 70kDa heat shock protein signature 44 64 - -
Psa5g1797 135 PRINTS 70kDa heat shock protein signature 71 90 - -
Psa5g1797 135 PANTHER 70 KDA HEAT SHOCK PROTEIN 8 104 - -
Psa5g1797 135 SUPERFAMILY Actin-like ATPase domain 6 63 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1797 Psa-Chr5 138762621 138767342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1797 9 103 Calmodulin-binding Proteins AT3G12580 63.158 1.11e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1797 K03283 - han:110872564 114.775