Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1792 ATGGGTAAGAAAGGAAGCAACTGGTTCTCATCAGTGAAGAAAGTTTTCAAGTCTTCTTCTAAGGACTCGCCGGTGCCGGAAAACAAGAAGGAAAAGGAAGAGAATTGGCAAAATGAAACAGCAGAGGAAGTATCTATGGAGCATTTTCCTGCATATAGTTCACCAGATATCACCAATGAAGGAAGTACCACATCAACACCAATAACGGAAGAAAGAAACCATGCTATTGCCTATGCAGTAGCAACAGCAGCAGCGGCTGAGGCTGCGGTGGCAGCTGCTGAAGCAGCTGCTAGAGTAGTGAGATTGGCAGGCTACGGACGTAACTCTAAGGTCGAAAGAGCAGCAATACTCATTCAATCACACTATAGAGGTTACCTAGCTCGACGTGCACTGCGTGCATTGAAGGGGTTAGTAAGATTACAAGCACTTGTGAGAGGACATAATGTGCGGAAGCAAGCACAGATGACAATGAGATGCATGCAAGCATTGGTGAGAGTACAAGGAAGAGTAAGAGCTCGCAGACTCCAATTGACTCATGAGAAACATCAAAGAACAGTTGAGGAAGAACAACAACATCATCCTATGACAAATGGTTGGGATTATAGGCGTCAAAGTAGCCAGAAAATCAAGGAAAAGGCTCTTCCACACACTTTCAACCGTCAGCAACAACAAAAGCAGTATTTGCATATAGATCCAACTCCAAGTGTTGATGATATTGAAAGCTATGTGAATGAACGTGAAAGAGCTCAATTGGATTGGAACTGGTTGGAACAATGGATGTTATCACAGTCACACAATGTTAAGCACTTAGGACTGGGCCCACTTGAGACCCCACCCTATACAACCACCACTGATGACATGTCTGAGGAAAAGACAGTTGAAATGGACATGATGGGCCTTATGAACCAAGAATATCATGAGTTAAGCCCAATCTCTAAATACCACCAAAGACAGCCCAGTGTACCAAGCTATATGGCCCCAACACAATCTGCAAAGGCCAAGATTCGGAGTCATGGCCCATCAAAGCATCGGGCTTCGTTTGGGTCTTACTGGAGCTCATCAACAAGGAGTCCTACAATTGGGCTGGGCTATGACTCGTCTGGCTCTAGCGGGGCCACGGCTGCTCATGCGATAACAAGAAGCCCAAGCCCAAAAATGAATGGGGTTCGTCTTCAATCGAAACGGATTTCGGGTGTTGCGGATTGGCCCATTCCTCCTGGAGGTCATGGATGGACAAGATTTGATTAA 1248 0.4567 MGKKGSNWFSSVKKVFKSSSKDSPVPENKKEKEENWQNETAEEVSMEHFPAYSSPDITNEGSTTSTPITEERNHAIAYAVATAAAAEAAVAAAEAAARVVRLAGYGRNSKVERAAILIQSHYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQGRVRARRLQLTHEKHQRTVEEEQQHHPMTNGWDYRRQSSQKIKEKALPHTFNRQQQQKQYLHIDPTPSVDDIESYVNERERAQLDWNWLEQWMLSQSHNVKHLGLGPLETPPYTTTTDDMSEEKTVEMDMMGLMNQEYHELSPISKYHQRQPSVPSYMAPTQSAKAKIRSHGPSKHRASFGSYWSSSTRSPTIGLGYDSSGSSGATAAHAITRSPSPKMNGVRLQSKRISGVADWPIPPGGHGWTRFD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1792 415 MobiDBLite consensus disorder prediction 23 41 - -
Psa5g1792 415 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
Psa5g1792 415 Pfam IQ calmodulin-binding motif 138 153 IPR000048 GO:0005515
Psa5g1792 415 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Psa5g1792 415 SMART iq_5 133 154 IPR000048 GO:0005515
Psa5g1792 415 SMART iq_5 110 132 IPR000048 GO:0005515
Psa5g1792 415 Pfam Protein of unknown function (DUF4005) 303 345 IPR025064 -
Psa5g1792 415 Coils Coil 172 192 - -
Psa5g1792 415 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Psa5g1792 415 PANTHER IQ-DOMAIN 5-RELATED 1 385 - -
Psa5g1792 415 Gene3D - 108 163 - -
Psa5g1792 415 PANTHER IQ-DOMAIN 21 1 385 - -
Psa5g1792 415 MobiDBLite consensus disorder prediction 15 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1792 Psa-Chr5 138543354 138546901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1792 1 385 IQD Protein Family AT3G49260 46.681 7.78e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1792 - - aprc:113873497 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1792 5 138543354 138546901 Psa5g1792 5 138543354 138546901 ECH