Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1783 ATGAATCGATATAAATACATGCATTATAACTTCACCTCCTCAGCCACTATGATCCATATAAGACTTATTTTGCTCCTATGTTTCTTACTTCATAATTTTCATGTCATCATTTGCAACAACAAAAACACAGACAGAGATATCCTTCTATCTTTCAAATTTCAATTAACTGACCCAAACAATGTTCTGTCAAATTGGACAGCAGATTCAAATCATTGTAACTGGTATGGTGTCAACTGTTCTACAGTTGGTGAAAGAGTTCAATCTCTCACCTTATCAGGACTTGGTCTCTCTGGTAAACTACCTTCTAACCTCTCCAACCTCACTTACCTTCATTCACTTGACCTGTCTAAGAACAATTTCCATGGCCAAATTCCTACCCAATTTGGTCAGTTCACACTCCTCAATGTCATTCAATTAGCTTTCAACAATCTCTCAGGTTCACTTCCACCACAATTGGGCCAACTGCATAATCTACAAAGTTTAGACTTTTCTGTCAACAATCTCACAGGTGAAATCCCTTCAACTTTTGGCAATCTCTTTTCTCTTAAGAATCTTTATTTGGCAAGCAACAAGTTTGTTGGTGAGATTCCAATTGAATTGGCCAACCTCCGTAATCTCTTAAGACTTCAACTCTTAGAGAACAATTTCACTGGCAAGTTTCCTACTTCTATTTTCTTCAACCTTTCTTCCTTAGTTTTCTTATCCCTCGCAAAGAACAATCTATCAGGCGAGTTGCCGCAAGATTTCGGCTACGCCTTTCCAAATTTAACCACACTTGCTCTGGCAACCAATAGGTTTGAAGGGGTGATTCCAAATTCTATTTCCAATTCATCACATCTTCAAGTTATTGATCTTGCTAACAATAGATTTCATGGGCCAATACCTCTTTTCAACAACCTGAAAAACCTCACTCATTTGATATTAAGTAATAACTATCTCACTTCCACAACATCATTGAATTTACAGTTTTTTGATTCACTTAGAAACTCCACTCAGTTGCAAATCCTTAAGGTCAACGATAACATCTTGGCTGGTGAACTTCCAAATTCTGTTGCCTATCTTTCAGGCAATCTACAACAGTTCTGTGTTTCTAATAATCATCTAAATGGAAGCATTCCTAAAGAAATGAACAAGTTTCAAAATCTCACATCCTTGTCTTTTGAACTGAATAATTTCACTGGAGAGTTACCAATAGAACTTGGAACACTCAAAAAATTGGAGCAGCTTTGGATACACCAAAATAGATTGTCTGGTGAAATTCCAGACATATTTGGAAATTTTACAAATCTGTATAGTCTTGCAATGAGAAACAACCAGTTCTCAGGTAGAATTCCCGCGAGCATCGGAAAATGCAAGAGATTGAGTTATCTGGACTTGGAAATGAATAAGCTTGTTGGTGTCATACCAATGGAGATTTTTCAACTCTCTGGATTGACAACTTTGTACTTAACTGGAAACTCTTTGAATGGTTCACTTCCTCCTGAACTCAAGATGGAGCAGCTAGAGACAATGATTGTTTCGGACAACAAGCTGTCGGGGAACATTCCTAAAATCGAAGTAAATGGCCTGAAGACACTTAAGATGGCAAGAAATAAATTTAGTGGCTCAATTCCAAATAGTCTAGGAGATTTAGCATCTCTTGAGACTTTGGATCTATCATCAAACAATCTCACTGGTCCAATTCCTGAGAGTTTAGAAAAGCTTAAGTATATGGTGAGTTTAAATTTATCTTTCAACACATTGGAAGGAGAGGTTCCAATGAAAGGTGTTTTTATGAACCTAAACCAGGTTGATCTTCAAGGTAACAAAAAAATATGTGGCCTTAACAATCAAGCTACGCACAAGTTGGGAGTCACTTTGTGTGTTGCAGGTAAAAAAAACAAGAGAAACAGTTTGCTCCACATCATCCTACCGATTATAGGTGCGACTGTTTTGTTCGTTTCAATGCTTTCTCTGTTGTGGATGCTATATTCCTTTAAGACGAAAAAAAAGGACGATAAAAGAAGTTTGTCATCAACTCCTCTAAAGGGGTTGCCTCAAAATATATCCTATGGTGATATTAAGCTAGCTACGAACAATTTTTCAGCTACAAACTTGGTTGGAAAAGGAGGCTTTGGTTCTGTTTACAAGGGAGTGTTCAACATTAGCACTTACGAAAGTCAAACCATCACATTTGCTGTTAAAGTTTTTGACCTGCAACAAAGAAAAGCCTCTCAGAGTTTTAGTGCAGAATGCGAAGCTTTGAAAAACGTCAGGCATCGGAATCTTGTCAAGGTGATCACTTCTTGCTCTAGCACTGATTACAAGGGGGATGATTTTAAGGCACTTGTTATGCATTTCATTCCTAATGGTAATTTGGAGATGAGTTTATACCCGGAAGATCTAGAATCGGGATCTTTACTAACCTTGTTGCAAAGGTTGAACATTGTTATTGATGTTGCATCTGCCATGGACTACTTGCACCATGATTGTGATCCACCAATAGTCCATTGTGATCTTAAACCTGCCAATGTACTGTTAGATGAAGATATGGTTGCACATGTAGCAGATTTTGGATTGGCAAGGTTTCTCTCTCAAAATGCATCAGAGAAACACAGCAGCACTCTAGAACTGAAGGGATCAATCGGCTATATCGCCCCAGAATATGGTCTAGGAGGCAAGGCTTCAACTAGTGGTGATGTGTACAGTTTTGGGATCCTACTGCTAGAGATATTCATAGCCAAAAAACCAACAGATGAAATGTTCAAAGAAGGATTAAACATGAACAACTTTGTATCAGAGATGGGTGAGAAGCAATTACTGAATATTGTTGATCAAAGGCTTATTAACCATTATGAATTTTCGATACAAAATTTCAGCAGCGATAGTCATAGTGGTGGATCCGGCGACATCAGCTATAGTGATGGTAGTAACACATATTGGACACAAAAAGCTGAGGAGTGCATAGTTGCTGCAATGAAAATCGGCTTGTCATGTGTAGCACATCATCCCAAAGATAGGTGGACCATGAGAGAAGCCATATCAAAATTACACGGAATTAAGCAGTTTATACTAGGCTTGTAA 3063 0.3797 MNRYKYMHYNFTSSATMIHIRLILLLCFLLHNFHVIICNNKNTDRDILLSFKFQLTDPNNVLSNWTADSNHCNWYGVNCSTVGERVQSLTLSGLGLSGKLPSNLSNLTYLHSLDLSKNNFHGQIPTQFGQFTLLNVIQLAFNNLSGSLPPQLGQLHNLQSLDFSVNNLTGEIPSTFGNLFSLKNLYLASNKFVGEIPIELANLRNLLRLQLLENNFTGKFPTSIFFNLSSLVFLSLAKNNLSGELPQDFGYAFPNLTTLALATNRFEGVIPNSISNSSHLQVIDLANNRFHGPIPLFNNLKNLTHLILSNNYLTSTTSLNLQFFDSLRNSTQLQILKVNDNILAGELPNSVAYLSGNLQQFCVSNNHLNGSIPKEMNKFQNLTSLSFELNNFTGELPIELGTLKKLEQLWIHQNRLSGEIPDIFGNFTNLYSLAMRNNQFSGRIPASIGKCKRLSYLDLEMNKLVGVIPMEIFQLSGLTTLYLTGNSLNGSLPPELKMEQLETMIVSDNKLSGNIPKIEVNGLKTLKMARNKFSGSIPNSLGDLASLETLDLSSNNLTGPIPESLEKLKYMVSLNLSFNTLEGEVPMKGVFMNLNQVDLQGNKKICGLNNQATHKLGVTLCVAGKKNKRNSLLHIILPIIGATVLFVSMLSLLWMLYSFKTKKKDDKRSLSSTPLKGLPQNISYGDIKLATNNFSATNLVGKGGFGSVYKGVFNISTYESQTITFAVKVFDLQQRKASQSFSAECEALKNVRHRNLVKVITSCSSTDYKGDDFKALVMHFIPNGNLEMSLYPEDLESGSLLTLLQRLNIVIDVASAMDYLHHDCDPPIVHCDLKPANVLLDEDMVAHVADFGLARFLSQNASEKHSSTLELKGSIGYIAPEYGLGGKASTSGDVYSFGILLLEIFIAKKPTDEMFKEGLNMNNFVSEMGEKQLLNIVDQRLINHYEFSIQNFSSDSHSGGSGDISYSDGSNTYWTQKAEECIVAAMKIGLSCVAHHPKDRWTMREAISKLHGIKQFILGL* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1783 1020 ProSiteProfiles Leucine-rich repeat profile. 302 323 IPR001611 GO:0005515
Psa5g1783 1020 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Psa5g1783 1020 Pfam Leucine Rich Repeat 157 179 IPR001611 GO:0005515
Psa5g1783 1020 Gene3D Phosphorylase Kinase; domain 1 676 780 - -
Psa5g1783 1020 ProSiteProfiles Protein kinase domain profile. 694 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1783 1020 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 17 106 - -
Psa5g1783 1020 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 100 174 - -
Psa5g1783 1020 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 178 1011 - -
Psa5g1783 1020 SMART serkin_6 694 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1783 1020 PANTHER RECEPTOR-LIKE PROTEIN 55 178 1011 - -
Psa5g1783 1020 PANTHER RECEPTOR-LIKE PROTEIN 55 100 174 - -
Psa5g1783 1020 PANTHER RECEPTOR-LIKE PROTEIN 55 17 106 - -
Psa5g1783 1020 SMART LRR_typ_2 300 326 IPR003591 -
Psa5g1783 1020 SMART LRR_typ_2 155 178 IPR003591 -
Psa5g1783 1020 SMART LRR_typ_2 403 426 IPR003591 -
Psa5g1783 1020 SMART LRR_typ_2 475 498 IPR003591 -
Psa5g1783 1020 SMART LRR_typ_2 253 276 IPR003591 -
Psa5g1783 1020 SMART LRR_typ_2 228 252 IPR003591 -
Psa5g1783 1020 SMART LRR_typ_2 544 568 IPR003591 -
Psa5g1783 1020 Gene3D Ribonuclease Inhibitor 40 196 IPR032675 -
Psa5g1783 1020 Pfam Protein tyrosine and serine/threonine kinase 697 917 IPR001245 GO:0004672|GO:0006468
Psa5g1783 1020 Pfam Leucine rich repeat 254 313 IPR001611 GO:0005515
Psa5g1783 1020 Pfam Leucine rich repeat 428 488 IPR001611 GO:0005515
Psa5g1783 1020 Pfam Leucine rich repeat 522 581 IPR001611 GO:0005515
Psa5g1783 1020 Gene3D Ribonuclease Inhibitor 296 616 IPR032675 -
Psa5g1783 1020 SUPERFAMILY L domain-like 41 314 - -
Psa5g1783 1020 ProSitePatterns Protein kinases ATP-binding region signature. 700 728 IPR017441 GO:0005524
Psa5g1783 1020 Gene3D Transferase(Phosphotransferase) domain 1 781 1017 - -
Psa5g1783 1020 ProSiteProfiles Leucine-rich repeat profile. 546 569 IPR001611 GO:0005515
Psa5g1783 1020 SUPERFAMILY L domain-like 356 609 - -
Psa5g1783 1020 SUPERFAMILY Protein kinase-like (PK-like) 669 1010 IPR011009 -
Psa5g1783 1020 Gene3D Ribonuclease Inhibitor 197 295 IPR032675 -
Psa5g1783 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1783 Psa-Chr5 138038225 138041848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1783 43 1015 Receptor kinase-like Gene Family AT3G47570 40.059 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa5g1783 PK_Tyr_Ser-Thr 9.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1783 - - mtr:MTR_3g092390 1583.16