Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1751 ATGGAAGCTTCATTTAAAATGAGAGTTATGAGAGTTTTTTTCGTGTTGCTGTTTCTGGTGACGGTGAAGGCTGTTAACCCGTCTTTAAACGACGACGTTTTGGGGTTGATTGTGTTCAAAGCGGATATACAAGATCCAAAGGGAAAGTTAACATCTTGGAATGAAGATGATGAAAGTGCTTGCAGTGGTAGTTGGGTTGGTGTGAAATGCAACGCTAGATCCAACAGAGTGGTGGAGGTTAACCTGAATGGGTTCTCTTTATCTGGAAGAATTGGTCGTGGGTTGCAACGTTTGCAGTTTCTGCGTCGGCTTTATTTGGCGAATAACAATCTTACCGGGAGTATAACCCCTAATATTGCTACTATTGATAACCTTAGGGTTCTTGATTTGAGTAATAATAATCTTTCGGGGGTTGTTCCTGATGATTTTTTTCGACAATGTGGGTCGATGAGAGTTGTTTCTTTAGCTGGGAATTTGTTTTCTGGGAACATACCTTCTAGTTTAGGGTCATGTTCAGCTGTTGCTAATGTTGACCTTTCTTTTAACCAGTTTGATGGGAATGTTCCTAAGGAGATTTGGAGTTTGAGTGGACTTAGGTCTCTTGATTTGTCTGATAATTTGTTGGAAGGTGAGATTCCGGAAGGTGTTGAGGCGTTGAAGAATTTGAGAAGCGTTAACTTGGCTAGGAATAGCTTTTCTGGAAAGATACCTTATGGGTTTGGAAGTTGTTTGCTTTTGAGGTCTATTGATTTTGGTGATAATTCTTTCTCGGGTAGTATTCCTAGTGATTTGAAGGATTTGGTGTTGTGTGGTTACTTTAGTTTGAGTGGAAATGCTTTCTCAGGAGATGTTCCTGATTGGATTGGAGAGATGAAGGGTCTTCAGACATTGGATCTTTCTAGGAATAGATTTTCTGGTCTGGTGCCGAACTCTTTAGGAAAACTTTGGTTAATGAAAACATTGAATCTTTCTGGAAATGGTTTCACTGGCAATCTTCCGGAGTCCATGGTGAATTGCACAAACCTTGTGGCTTTGGATGTTAGCCAAAATTCATTGTCTGGAGATCTTCCTTCTTGGATTTTTGGGTCGGATTTGGAGAAGGTTTCAGTGGCAGATAACAAAATGAGTGGTAGGGTGAAAAGCCCTCTCTATTCCTTGAAAAAAGTTGTGGTTCAGAGTCTTCAAGTTTTGGATTTGTCTCACAATGCATTTTCTGGTGAAATCACTTCTGCTGTTTCACATTTAAGCAGCTTGCAGGTTTTGAATTTATCATATAACTCTTTGGGAGGTCTTATTCCAGCTTCAATCGGTGATTTGAAAACATGTTCTAGTCTTGATTTGAGTTATAATAAACTAAACGGAAGCATACCTCGGGAAATTGGTGGAGCTCTTTCCTTGAAAGAACTTATTTTGGAAAACAACTTCCTTATTGGGAAAATCCCAATGTCAATTGAGAACTGCTTTCCATTAACAACTTTGATTCTGTCGAAGAACAAGCTGAATGGGTCAATACCAGCAGCACTTGCAAAACTCACCAATTTGAAAACTGTGGACATATCATTCAACAATCTTAATGGAAGCCTTCCTAAACAATTGGCCAACCTTCCCAATCTCCTAACCTTCAATTTATCTCACAATAATCTTCAGGGCGAACTGCCGGCTGGTGGTTTCTTTAACACCATTTCACCTTCATCCGTTGCTGGCAATCCATTTCTGTGTGGCTCTGTTGTAAACAAAAAATGCCCTGTTAGGCTCCCAAAGCCTATTGTTCTGAATCCCAACTTTTCTGGTGACTCTGACCCAGGTTCACCTACTCCAATGTCAGGTCACAAGAGAAATATTCTCAGCATTTCAGCACTCATTGCCATTGGTGCAGCTGCTTTCATTGTAATTGGTGTCATTGGCATCACTGTTCTCAACCTCCGTGTTCGGTCCGCCGCATCTCGATCTCCAGCGGCCCTTGATTTTTCTGCAGGGGATGATTATAGCCGTTCGCCAACCACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCAGGTGAACCTGATTTCAGCTCTGGTGCACATGCTTTGCTTAACAAAGATTGCGAGCTTGGGCGTGGAGGATTTGGTGCTGTGTACCAAACAGTACTAGGGGACGGTCGCTCAGTTGCTATAAAGAAGCTCACCGTGTCGAGCCTTGTCAAGTCACAAGAAGATTTCGAGAGGGAAGTGAAGAAATTAGGAAAAGTCAGACACCAAAATCTTGTTGAACTTGAAGGCTATTATTGGACTTCATCACTTCAACTCCTCATATATGAGTTTGTCTCTCGCGGTAGCCTTTACAAACATCTCCATGAAGGATCAGGCGAAAACTTCCTTTCATGGAACGAGAGGTTTAACGTCATTCTCGGGTCGGCAAAGGCCTTAGCTCACTTGCATCACTCCAACATCATTCACTACAACATTAAGTCAACCAACATCCTCATTGATAGCTACGGCGAACCTAAAGTAGGCGATTACGGCCTAGCAAGGCTGCTACCAATGCTCGACCGCTACGTCTTGAGCAGCAAAATTCAAAGCGCACTCGGCTACATGGCACCGGAGTTTGCCTGCAAAACAGTGAAAATAACAGAGAAATGCGATGTTTATGGATTCGGAGTTTTGGTTTTGGAGATTGTGACAGGGAAAAGGCCAGTAGAGTATATGGAGGATGATGTTGTTGTACTTTGTGACATGGTAAGAGGAGCATTGGATGAAGGGAGAGTAGAGGAATGTATTGATGAGAGGCTACTAGGGAAGTTTCCAGTAGAAGAAGTGATTCCTGTGATTAAGCTTGGTTTGGTATGTACTTCACAAGTGCCATCTAATAGGCCAGAAATGGGAGAGGTAGTTACCATATTGGAGCTTATAAGATGCCCTTCAGAAGGACAAGAAGAGTTGTTGGGATGA 2931 0.422 MEASFKMRVMRVFFVLLFLVTVKAVNPSLNDDVLGLIVFKADIQDPKGKLTSWNEDDESACSGSWVGVKCNARSNRVVEVNLNGFSLSGRIGRGLQRLQFLRRLYLANNNLTGSITPNIATIDNLRVLDLSNNNLSGVVPDDFFRQCGSMRVVSLAGNLFSGNIPSSLGSCSAVANVDLSFNQFDGNVPKEIWSLSGLRSLDLSDNLLEGEIPEGVEALKNLRSVNLARNSFSGKIPYGFGSCLLLRSIDFGDNSFSGSIPSDLKDLVLCGYFSLSGNAFSGDVPDWIGEMKGLQTLDLSRNRFSGLVPNSLGKLWLMKTLNLSGNGFTGNLPESMVNCTNLVALDVSQNSLSGDLPSWIFGSDLEKVSVADNKMSGRVKSPLYSLKKVVVQSLQVLDLSHNAFSGEITSAVSHLSSLQVLNLSYNSLGGLIPASIGDLKTCSSLDLSYNKLNGSIPREIGGALSLKELILENNFLIGKIPMSIENCFPLTTLILSKNKLNGSIPAALAKLTNLKTVDISFNNLNGSLPKQLANLPNLLTFNLSHNNLQGELPAGGFFNTISPSSVAGNPFLCGSVVNKKCPVRLPKPIVLNPNFSGDSDPGSPTPMSGHKRNILSISALIAIGAAAFIVIGVIGITVLNLRVRSAASRSPAALDFSAGDDYSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLGDGRSVAIKKLTVSSLVKSQEDFEREVKKLGKVRHQNLVELEGYYWTSSLQLLIYEFVSRGSLYKHLHEGSGENFLSWNERFNVILGSAKALAHLHHSNIIHYNIKSTNILIDSYGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEIVTGKRPVEYMEDDVVVLCDMVRGALDEGRVEECIDERLLGKFPVEEVIPVIKLGLVCTSQVPSNRPEMGEVVTILELIRCPSEGQEELLG* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1751 976 ProSiteProfiles Leucine-rich repeat profile. 124 145 IPR001611 GO:0005515
Psa5g1751 976 CDD STKc_IRAK 698 964 - -
Psa5g1751 976 PRINTS Leucine-rich repeat signature 125 138 - -
Psa5g1751 976 PRINTS Leucine-rich repeat signature 415 428 - -
Psa5g1751 976 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 9 973 - -
Psa5g1751 976 SMART LRR_typ_2 511 534 IPR003591 -
Psa5g1751 976 SMART LRR_typ_2 122 145 IPR003591 -
Psa5g1751 976 SMART LRR_typ_2 195 219 IPR003591 -
Psa5g1751 976 SMART LRR_typ_2 98 121 IPR003591 -
Psa5g1751 976 SMART LRR_typ_2 535 559 IPR003591 -
Psa5g1751 976 SMART LRR_typ_2 291 314 IPR003591 -
Psa5g1751 976 SMART LRR_typ_2 415 439 IPR003591 -
Psa5g1751 976 Gene3D Ribonuclease Inhibitor 30 189 IPR032675 -
Psa5g1751 976 Gene3D Ribonuclease Inhibitor 190 287 IPR032675 -
Psa5g1751 976 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Psa5g1751 976 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 973 - -
Psa5g1751 976 Pfam Leucine rich repeat 490 548 IPR001611 GO:0005515
Psa5g1751 976 Pfam Leucine rich repeat 393 452 IPR001611 GO:0005515
Psa5g1751 976 Pfam Leucine rich repeat 274 327 IPR001611 GO:0005515
Psa5g1751 976 SUPERFAMILY L domain-like 289 565 - -
Psa5g1751 976 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Psa5g1751 976 Pfam Protein tyrosine and serine/threonine kinase 694 901 IPR001245 GO:0004672|GO:0006468
Psa5g1751 976 Gene3D Phosphorylase Kinase; domain 1 686 768 - -
Psa5g1751 976 ProSiteProfiles Protein kinase domain profile. 692 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1751 976 SUPERFAMILY Protein kinase-like (PK-like) 695 967 IPR011009 -
Psa5g1751 976 Pfam Leucine Rich Repeat 124 143 IPR001611 GO:0005515
Psa5g1751 976 Pfam Leucine Rich Repeat 465 487 IPR001611 GO:0005515
Psa5g1751 976 Gene3D Transferase(Phosphotransferase) domain 1 769 973 - -
Psa5g1751 976 SUPERFAMILY RNI-like 80 377 - -
Psa5g1751 976 Gene3D Ribonuclease Inhibitor 293 584 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1751 Psa-Chr5 135651687 135656577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1751 12 974 Receptor kinase-like Gene Family AT3G56370 66.632 0.0 1238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Psa5g1751 PK_Tyr_Ser-Thr 9.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1751 - - mtr:MTR_3g093930 1666.36