Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1738 ATGGTTTGGCTTTGGGCCACTTCCATGACAATCTCTTCCATCTTCTTCATTTTCGTTCTCTTTTTCTTAATCCTTCGGTTCTTCCGTAAAACCTCTGCACTTCATATTCTGAAACGCTGGTGGCTTTCGTTTGAAAGCCGTCTTCATCTTCACCAATCCTTCAAAATTCCGCTTTACGATCATAATTTCCGGGAAAATCAGCTTTACCGTAAAATTATTACTTACCTTGATTCACTACCTTCCGTTCAGGACTCCGATTTCACCAACCTCTTCTCCGGTGCCAATCCCTCTGATATTTTCCTTCATCTCGATGCGAATCAAACCGTTCACGATACTTTCTTAGGAGCTAAGCTTTCTTGGACGAACAACACTGTTGCCGGCGACTCCGCTTCTGCGCTCGTTCTTAGAATGAAAAAGAAAGATAAGCGTAGGGTTTTTCAGCAGTACTTCCAGCATATTCTATCTGTAGCAGACGAAATTGAACAGCGAAGGAAGAAGGATATAAAACTGTTCATGAATTCCGGCTCCGGGGAAACATATAGGTGGCGTTCGGTTCCGTTTACTCATCCGGCAAGCTTCGAAACGGTGGCGATGGACGTAGAACTGAAAAACAAGGTTAAAACAGATCTGGATCAGTTTCTGAAATCAAAGCAGTACTACAATAGATTAGGCCGCGTTTGGAAGAGGAGTTACCTTCTCTACGGTGCTTCCGGTACCGGAAAATCTAGTTTCGTAGCTGCTATGGCGAAGTTTCTCTGCTATGACGTTTACGATATCGACGTTTCCAAGGTGGTGGACGGTTCCGATTGGAAAACGCTGTTGATGCAAACAACGCCGAAGTCAATGATCTTGATCGAGGATCTCGATCGTTTATTAGCGGGAAAATCAACGGCTGTTAACTTATCAAGTGTATTGAACTTCATGGATGGAATAATGTCTTGTTGCGGTGAAGAGCGTGTGATGGTGTTCACGATGAATGGTACAAAAGATGAAGTTGATCAAGCGGTTTTAAGACCTGGGAGAGTTGATGTTCACATACACTTCCCCTTATGTGATTTCTCCACCTTTAAGATTCTAGCAAATAGTTATTTAGGGTTGAAGGAACACAAGCTTTTCCCTCAGGTGGAAGAGGTTTTTCAGACGGGTGCACGGCTCAGCCCGGCGGAAGTTGGTGAGATTATGATATCGAACCGGAATTCGCCGAGCCGGGCCTTGAAAACCGTTATAACCGCTATGCAGGTGCAATCCAACGGGCAGGGGCAGAGGTTGAGCAATAGTGGGTCGGGTCGGAGCTCCGATGAGGTTAGCGATGCAAATGGTGTGATATGTAGAGAGAGTGTTCATACGGTGAGGGAGTTTCGGAAGTTGTATGGGCTTTTGCGTTTGGGAAGTAGGAGGAAGGAGGAGTCTGGTTATTCGGGTCCCATAGAGAAAGAACCGCCGCGCATAGAGGGTCGGGTCGGATAA 1467 0.4574 MVWLWATSMTISSIFFIFVLFFLILRFFRKTSALHILKRWWLSFESRLHLHQSFKIPLYDHNFRENQLYRKIITYLDSLPSVQDSDFTNLFSGANPSDIFLHLDANQTVHDTFLGAKLSWTNNTVAGDSASALVLRMKKKDKRRVFQQYFQHILSVADEIEQRRKKDIKLFMNSGSGETYRWRSVPFTHPASFETVAMDVELKNKVKTDLDQFLKSKQYYNRLGRVWKRSYLLYGASGTGKSSFVAAMAKFLCYDVYDIDVSKVVDGSDWKTLLMQTTPKSMILIEDLDRLLAGKSTAVNLSSVLNFMDGIMSCCGEERVMVFTMNGTKDEVDQAVLRPGRVDVHIHFPLCDFSTFKILANSYLGLKEHKLFPQVEEVFQTGARLSPAEVGEIMISNRNSPSRALKTVITAMQVQSNGQGQRLSNSGSGRSSDEVSDANGVICRESVHTVREFRKLYGLLRLGSRRKEESGYSGPIEKEPPRIEGRVG* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1738 488 MobiDBLite consensus disorder prediction 416 437 - -
Psa5g1738 488 Pfam ATPase family associated with various cellular activities (AAA) 232 350 IPR003959 GO:0005524|GO:0016887
Psa5g1738 488 Pfam Domain associated at C-terminal with AAA 34 122 IPR025753 -
Psa5g1738 488 PANTHER BNAANNG18710D PROTEIN 17 432 - -
Psa5g1738 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 412 IPR027417 -
Psa5g1738 488 MobiDBLite consensus disorder prediction 468 488 - -
Psa5g1738 488 CDD AAA 228 350 - -
Psa5g1738 488 Gene3D - 347 414 - -
Psa5g1738 488 SMART AAA_5 227 352 IPR003593 -
Psa5g1738 488 PANTHER BCS1 AAA-TYPE ATPASE 17 432 - -
Psa5g1738 488 MobiDBLite consensus disorder prediction 416 435 - -
Psa5g1738 488 Gene3D - 183 346 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1738 Psa-Chr5 135036777 135039346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1738 223 348 Calmodulin-binding Proteins AT3G56690 25.532 7.95e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1738 - K08900 gmx:100797983 763.837