Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1735 ATGACCGGTTCAGCCAATACCAAGATTCTGCAAGAGCTGTTGTTGTACGCAGCTAGGGCGGCGCTGAGTTACTGGGTATTGGTCACCGGACTCCGATACCTTGACCCCAACCGTGAATCAACCAAGAAAGCTCTTGAACAAAAGAAACAGATTGCCAAGCGTCTAGGTCGTCCCCTCATTCAAACCAATCCCTATGAGGATGTAATAGCCTGTGATGTTATAAACCCTGACCATATTGATGTGGAATTTGACTCCATTGGGGGACTGGACACTATTAAACAAGCTTTGTTTGAGCTTGTTATTCTACCCTTGAAACGGCCTGACTTGTTTTCGCATGGCAAGCTCCTTGGACCACAGAAGGGGGTTCTGTTGTATGGACCCCCTGGCACTGGGAAAACCATGCTTGCAAAAGCTATTGCCAAGGAGTCTGGAGCAGTGTTCATTAATGTGAAGATATCTAACCTCATGAGCAAATGGTTCGGGGATGCCCAAAAGCTTGTGTCTGCTGTATTTAGCTTGGCTGATAAGCTTCAGCCTGCCATCATATTCATTGATGAAGTTGACAGTTTTTTGGGTCAACGCCGTTCATCAGATCACGAGGCTATGCTAAATATGAAAACTGAGTTCATGGCTCTATGGGACGGATTCACCACCAACAAGAATGCTCGAGTTATGGTACTTGCAGCAACTAATCGCCCTTCAGAACTTGACGAAGCAATACTCCGACGACTTCCTCAAGCTTTTGAAATTGGATATCCAAGCCGGCGAGAGAGGGCCGAGATATTGAAGGTTATCTTAAAGGGAGAAAGGATTGAAAACAACATAGACTTTGATTGTATAGCGGGATTATGTAAGGGTTACACTGGTTCAGATCTATTTGATCTTTGCAAGAAGGCTGCATATTTTCCTGTTAGAGAACTACTGGATAATGAGAAGCGAGGGAAACAAACTCATGAACCTAGACCATTATCGCAGTTAGATTTGGAGAAGGCCCTTGCCACTTCGCAGAAGACAACGGTTGCTGCAAATGAATACGATAGAATGAACCAACAGTCATCGTCAAGACGGCCGTTTCCAGGTGAGAGTGACTATGATGTTCAAGCTGCAATCAAGGAAATTTCTAAGCTTATGGGTTCTCACATGATTAACCTCCAATTAGATTCTCAGGATGCTTAA 1176 0.4456 MTGSANTKILQELLLYAARAALSYWVLVTGLRYLDPNRESTKKALEQKKQIAKRLGRPLIQTNPYEDVIACDVINPDHIDVEFDSIGGLDTIKQALFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVKISNLMSKWFGDAQKLVSAVFSLADKLQPAIIFIDEVDSFLGQRRSSDHEAMLNMKTEFMALWDGFTTNKNARVMVLAATNRPSELDEAILRRLPQAFEIGYPSRRERAEILKVILKGERIENNIDFDCIAGLCKGYTGSDLFDLCKKAAYFPVRELLDNEKRGKQTHEPRPLSQLDLEKALATSQKTTVAANEYDRMNQQSSSRRPFPGESDYDVQAAIKEISKLMGSHMINLQLDSQDA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1735 391 CDD AAA 116 252 - -
Psa5g1735 391 SMART AAA_5 118 254 IPR003593 -
Psa5g1735 391 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Psa5g1735 391 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 375 - -
Psa5g1735 391 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Psa5g1735 391 Gene3D - 253 333 - -
Psa5g1735 391 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 3 375 - -
Psa5g1735 391 Gene3D - 80 339 IPR027417 -
Psa5g1735 391 Pfam AAA+ lid domain 274 309 IPR041569 -
Psa5g1735 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1735 Psa-Chr5 134873478 134881432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1735 81 312 Calmodulin-binding Proteins AT3G56690 34.874 1.65e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1735 K22530 - gmx:100796908 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1735 5 134873478 134881432 Psa5g1735 5 134873478 134881432 ECH