Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1733 ATGAAGGGTTCATCAGAAAGAAAGTACATGCAAGAGTTTCTCCTATACGCAGCAAGCGCGGCGTTGAGTTGTTTGGTATTATTCACGGGTCTCCATTACTTAGACCCCAACCGCGATTCTTCCAAGAAAGCTCTCGAACACAAGAAAGCCATTGCAAAACGTCTAGGTCGTCCCCTCATTCATACAGATCAATATGAGGATATAATAGCAGGTGATGTTATAAATCCTGACCACATTGATGTAGAGTTTGACTCCATTGGGGGACTGGAATCGATTAAAGAAACTTTGTTTGAGCTTGTTATTCTACCCTTGAAACGGCCCGAGTTGTTTTCGCATGGCAGGCTCCTTGGACCATTAAAGGGGGTCCTGTTGTATGGACCCCCGGGCACCGGGAAAACCATGCTTGCCAAAGCTATTGCCAGGGAGTCCGGAGCGGTTTTTATTAATGTGAGGATATCCAACCTGATGAGCAAATGGTTCGGAGATGCCTCAAAGCTTGTGGCTGCTGTATTTAGTTTGGCTTATAAGCTTCAGCCTGCCATCATATTCATTGATGAAGTTGACAGTTTTTTGGGTCAGCGTCGTCAATCAGATCATGAGGCTCTGTTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGATTCACTACCAACCAGAATGCCCGAGTTATGGTACTTGCAGCAACTAATCGTCCTTCAGAACTTGATGAAGCAATACTTCGGCGTTTTCCTCAAGCTTTTGAAATTGGACTTCCAGACCAGAAAGAAAGGGCTGATATATTGAAAATTATCTTAAAGGGTGAGAGGATTGAAGATAATATAGACCTCGATAGTATAGCTAGCTTATGTGAGGGTTACACTGGTTCAGATCTATTTGATCTTTGTCAGAAGGCTGCTTATTTTCCTATCAGAGAACTGCTGGAATATGAGAAGAAAGGAAAACAATCTCCTGCACCTAGACGTTTGTCTCAGTTAGATTTGGAAAAGGCCCTCTCCACTTCACGGACGATGGTTGCTGCAAGCGAATACGATGGATTAAACCACCAGTCATCATCAAGACGGACATTTCCTGTTGATTCAGAGTAG 1089 0.4362 MKGSSERKYMQEFLLYAASAALSCLVLFTGLHYLDPNRDSSKKALEHKKAIAKRLGRPLIHTDQYEDIIAGDVINPDHIDVEFDSIGGLESIKETLFELVILPLKRPELFSHGRLLGPLKGVLLYGPPGTGKTMLAKAIARESGAVFINVRISNLMSKWFGDASKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRQSDHEALLNMKTEFMALWDGFTTNQNARVMVLAATNRPSELDEAILRRFPQAFEIGLPDQKERADILKIILKGERIEDNIDLDSIASLCEGYTGSDLFDLCQKAAYFPIRELLEYEKKGKQSPAPRRLSQLDLEKALSTSRTMVAASEYDGLNHQSSSRRTFPVDSE* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1733 362 Pfam AAA+ lid domain 274 309 IPR041569 -
Psa5g1733 362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 321 IPR027417 -
Psa5g1733 362 SMART AAA_5 118 254 IPR003593 -
Psa5g1733 362 MobiDBLite consensus disorder prediction 343 362 - -
Psa5g1733 362 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Psa5g1733 362 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Psa5g1733 362 Gene3D - 80 344 IPR027417 -
Psa5g1733 362 CDD AAA 87 252 - -
Psa5g1733 362 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Psa5g1733 362 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 2 344 - -
Psa5g1733 362 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 2 344 - -
Psa5g1733 362 Gene3D - 253 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1733 Psa-Chr5 134731794 134737540 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1733 41 318 Calmodulin-binding Proteins AT3G56690 32.979 1.38e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1733 K22530 - gmx:100796908 591.267