Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1721 ATGGGTCATTGCTGCAGCAAAAACACTGCAGTCGACAGCGACACCGTCGCCACCGATCACAACCTCAAATCATCTAATCACGATGTATCACACCCTGCCGGAAACTCAGTCTCCGGCATCAGTGATGCTACTCCGGGAAGGCAAACCCCTGCGACATCGTTCTCGACTAGTCCTTTCAATAGTCCTCTCCCCGCAGGTGTGGCGCCGTCACCGGCTGTCAGGACTCCGGGAAGGAAATTCAGGTGGCCGCTTCCTCCGCCGTCCCCGGCAAAGCCGATAATGGCGGCTTTGATGCGGAGGCAGGGGAAGACGAAACCGAAAGACGGACCGATACCTGAGGAACAAGGGGAAAGTGGTGAGGGAGAGAGGACGTTGGATAAGAGCTTTGGATATGGGAAGAATTTTGGGGCGAAGTTTGAGCTTGGGAAGGAAGTTGGTCGAGGGCATTTCGGTCATACTTGTTGGGCTAAAGGGAAGAAAGGTGAACTTAAGGGAGTATCCGTGGCTGTGAAAATCATTACCAAAGCTAAGATGACTTCAGCAATAGCAATTGAAGATGTGAGAAGGGAGGTGAAAATGTTGAAAGCCTTGTCTGGACATAGGAATTTGGTCAAGTTTTATGAAGCATTTGAGGATGTGAATAACGTCTACATTGTGATGGAGTTATGCGAGGGTGGAGAATTATTGGACAGAATTCTAGATAGAGGTGGAAGATACACAGAGGAGGATGCCAAAGTTATTCTTCTACAAATTCTGAATGTAGTTGCCTTTTGTCATCTTCAGGGAGTTGTTCATCGCGATCTAAAACCAGAGAATTTTCTTTTTCTCTCAAAAGATGAGGATGCTGTCCTGAAAGTTATTGATTTTGGTCTATCTGATTTTGTTAGGCCAGATCAACGCCTTAATGATATTGTTGGTAGTGCCTATTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGGAGACTTATGGAGTGTTGGAGTTATATCGTACATATTGTTATGTGGAAGTAGACCGTTTTGGGCACGGACTGAATCAGGAATCTTCCGATCTGTGTTAAGAGCAAATCCTAACTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTTGTGAAGAGACTTTTGAACAAGGACCATCGGAAAAGGATGACAGCTGCTCAAGCTCTATCTCACCCATGGTTGAGAGATGAAAGAAATGCCATTCCTTTAGATATTCTGATTTACAAGTTAGTCAAGTCATACGTACGTGCCTCGCCTTTGAAACGTTCGGCATTGAAGGCTCTCTCAAAAGCATTGCCAGAGGACGAGATTACCTACCTTAAAGCACAATTTAGCCTCTTGGAACCTAAAGATGGTTGCGTTTCGCTTGAGAATTTCAGAGTTGCTCTCATGAAAAATGCAACTGATGCCATGAAGGAAGCAAGGGTCCCTGACATTCTAAATTTGATGGATCCACTCTCCTATAAAAAACTGGACTTCGAAGAGTTTTGCGCTGCCGCAATCAGTGTATACCAGCTTGAAGTTCATCCAGAATGGGATAAAATTTCCACCACAGCTTTTGATTATTTTGACGAGGCAGGGAACCGTGTCATTTCACTCGAGGAGTTGGCACAGGAGATGAATTTGGGTCCTTCTGCTTACTCTTTAATGGGTGACTGGATCAGAAAATCCGACGGAAAACTCAGCTTGGTCGGATATACAAAGTATTTGCACGGTGTCACAATTCGTAGTACAAATACAAGACACCGATAG 1773 0.4495 MGHCCSKNTAVDSDTVATDHNLKSSNHDVSHPAGNSVSGISDATPGRQTPATSFSTSPFNSPLPAGVAPSPAVRTPGRKFRWPLPPPSPAKPIMAALMRRQGKTKPKDGPIPEEQGESGEGERTLDKSFGYGKNFGAKFELGKEVGRGHFGHTCWAKGKKGELKGVSVAVKIITKAKMTSAIAIEDVRREVKMLKALSGHRNLVKFYEAFEDVNNVYIVMELCEGGELLDRILDRGGRYTEEDAKVILLQILNVVAFCHLQGVVHRDLKPENFLFLSKDEDAVLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEGDLWSVGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALSHPWLRDERNAIPLDILIYKLVKSYVRASPLKRSALKALSKALPEDEITYLKAQFSLLEPKDGCVSLENFRVALMKNATDAMKEARVPDILNLMDPLSYKKLDFEEFCAAAISVYQLEVHPEWDKISTTAFDYFDEAGNRVISLEELAQEMNLGPSAYSLMGDWIRKSDGKLSLVGYTKYLHGVTIRSTNTRHR* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1721 590 MobiDBLite consensus disorder prediction 1 72 - -
Psa5g1721 590 CDD STKc_CAMK 138 400 - -
Psa5g1721 590 ProSitePatterns Protein kinases ATP-binding region signature. 145 171 IPR017441 GO:0005524
Psa5g1721 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Psa5g1721 590 Pfam Protein kinase domain 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1721 590 MobiDBLite consensus disorder prediction 101 124 - -
Psa5g1721 590 SMART serkin_6 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1721 590 SUPERFAMILY EF-hand 434 578 IPR011992 -
Psa5g1721 590 Gene3D Transferase(Phosphotransferase) domain 1 229 420 - -
Psa5g1721 590 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 47 584 - -
Psa5g1721 590 ProSiteProfiles Protein kinase domain profile. 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1721 590 Gene3D - 440 508 - -
Psa5g1721 590 SUPERFAMILY Protein kinase-like (PK-like) 138 425 IPR011009 -
Psa5g1721 590 PANTHER SERINE/THREONINE-PROTEIN KINASE 47 584 - -
Psa5g1721 590 Gene3D Phosphorylase Kinase; domain 1 133 228 - -
Psa5g1721 590 Gene3D - 421 549 - -
Psa5g1721 590 MobiDBLite consensus disorder prediction 8 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1721 Psa-Chr5 133724884 133731935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1721 1 584 EF-hand Containing Proteins AT3G50530 57.256 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa5g1721 Pkinase 4.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1721 - - var:108331904 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1721 5 133724884 133731935 Psa5g1721 5 133724884 133731935 ECH