Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1699 ATGGAGGCTTTGAAAATTTTACTTGATGTGAGAAATCACCCTGTTTTGATTCATTGCAAACGAGGAAAGCATAGAACAGGTTGTGTAGTTGGTTGCTTCAGAAAGATGCAGAACTGGTGTCTGTCTTCTGTGTTTGAGGAGTACCAGCGCTATGCTGGTGCTAAATCCAGGACAACGGATTTAACATTTATAGAGATGTTTGACATCATAAATCTTAGGCAGTGCCTCTACAGCATCATCTACCAGTATCAAGGTGCTTCAAAGAAGCGCAGATTGATGTATCAAGGCGAGACTACGCAGAAGCCACCCCGTTTGACATCGTTTTAG 327 0.4251 MEALKILLDVRNHPVLIHCKRGKHRTGCVVGCFRKMQNWCLSSVFEEYQRYAGAKSRTTDLTFIEMFDIINLRQCLYSIIYQYQGASKKRRLMYQGETTQKPPRLTSF* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1699 108 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 1 91 - -
Psa5g1699 108 PANTHER TYROSINE-PROTEIN PHOSPHATASE 1 91 - -
Psa5g1699 108 Gene3D Protein tyrosine phosphatase superfamily 1 71 IPR029021 -
Psa5g1699 108 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 2 69 IPR029021 -
Psa5g1699 108 Pfam Tyrosine phosphatase family 2 69 IPR004861 -
Psa5g1699 108 ProSitePatterns Tyrosine specific protein phosphatases active site. 17 27 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1699 Psa-Chr5 132195141 132195677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1699 1 102 Protein tyrosine phosphatase (PTP) family AT3G02800 66.990 3.95e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1699 K18045 - gmx:100787713 187.578