Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1691 ATGAGTTCCGGTGAGTTGGGTTGCATCTACGCCTCCTTGATTCTCCACGACGATGGAATCCCAATCACCGCCGAGAAGATCAGCACACTCTTGAAGGCTGCCGATGTCACCGTCGAATCCTACTGGCCTAGCCTTTTCGCCAAGCTTACTCAGAGCAAGAACGTGGACGATCTTGTTTTGAACGCTGGCGCAGCCGGTGGGGCCGCCGTTGTTTCAGCCGGTGGAGCAGCACCTGCCGCTGCTGGTGGTGCAGCAGCAGCAGAAGCACCTGCGGAGGCAAAGAAGGAAGAGGCCAAGGAAGAAAGTGATGATGACATGGGCTTTAGTTTGTTTGATTAG 339 0.5516 MSSGELGCIYASLILHDDGIPITAEKISTLLKAADVTVESYWPSLFAKLTQSKNVDDLVLNAGAAGGAAVVSAGGAAPAAAGGAAAAEAPAEAKKEEAKEESDDDMGFSLFD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1691 112 Hamap 50S ribosomal protein L12 [rpl12]. 6 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Psa5g1691 112 MobiDBLite consensus disorder prediction 90 106 - -
Psa5g1691 112 Pfam 60s Acidic ribosomal protein 22 111 - -
Psa5g1691 112 PRINTS Ribosomal protein P2 signature 25 36 IPR001859 GO:0003735|GO:0005840|GO:0006412
Psa5g1691 112 PRINTS Ribosomal protein P2 signature 84 98 IPR001859 GO:0003735|GO:0005840|GO:0006412
Psa5g1691 112 PRINTS Ribosomal protein P2 signature 99 110 IPR001859 GO:0003735|GO:0005840|GO:0006412
Psa5g1691 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 112 - -
Psa5g1691 112 CDD Ribosomal_P1 5 61 - -
Psa5g1691 112 Gene3D - 1 63 IPR038716 -
Psa5g1691 112 MobiDBLite consensus disorder prediction 85 112 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1691 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 56.140 6.78e-39 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1691 K02942 - sind:105166781 124.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1691 5 131600278 131601990 Psa5g1691 5 131600278 131601990 ECH