Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1655 ATGGGTTCTCTTGACTGTGTTCCATCGCTTGAAGATGGTACGGCGGTGTTGTCTCTGAATTCGCTACCGTTAGGGTTCCGATTCCGACCTACCGACGAGGAACTTATCGATTACTATCTACGTTCGAAGATCAATGGAAATGGGGACGAGGTTTGGGTTATACGAGAAATTGATGTCTGCAAATGGGAACCCTGGGATATGCCTGATTTGTCAGTGATACGAAACAAGGATCCGGAGTGGTTTTTCTTCTGTCCACAGGATCGAAAGTATCCAAACGGACATAGATTGAACAGAGCAACTAATCATGGATATTGGAAGGCAACAGGAAAGGACCGGAAAATCAAGTCAGGAACCCTCTTGATTGGGATGAAGAAGACTTTAGTTTTCTACAGTGGCCGTGCACCTAAAGGGAAGAGGACTAATTGGGTTATGCATGAGTATCGTCCCACCCTGCAGGAGCTTGATGGTACCAACCCAGGACAGAGTCCATATGTTCTCTGTCGATTATTTAAGAAAAACGATGAGAGCATTGAAGCATCAAACTGTGGTGAAGTGGAGCAGACTAATTCAGCTCCTATGGCTGCCAATTACTCTCCAGAAGAAATACAATCTAATCCAGCTCCTATTACAGCATCCACATCACAGGTCACGGAGGAGGATAAGCAGCTGGCTATTATCCCCGATATCTATGAGGAAACAATATCCGACGCTATAAACTCAGTTGAGTGCCATAGTGATGGATATGGTGCTCATGATGTTCAAAAACAAATTGAAAAACTAGTTGCAGAGGAGGATCATGCATTGAACTTTGACATATATTATAACCCGAAAGATGGTCTATTATTAGATGACAGGTTATACTCGCCAGTTTTGGCACATATGCCACCTGAATTTGATTATCAAGCAAACAGTGAATCTGACGGTCAATGTGGACTTCAATATGGTACCAATGAGATTAATATTTCAGACTTCTTAGATTCAAATCTTAATTGGGATCAAATTCCCTGTGAGGAGTCCAGTAATTACCAGCAGAACTTCCCCCTCTTGTTAAATGTTAAGGACAATGGTTCAGGAAGCGACTCAGACGCAGAAGTAGCCAATATGATGACTTGTACGCAAGCTGTTTATCCTCACGAGGTAATAGACAGAAGGATTCCCTTTACAACAACACCATCGTTTTGCCGCACCTTTGACTATAATGGTGGTGATCAAAAGAGCGATGTTGTATTATTACAAAACAAGTTCCAGACAACTTTTCCATCCGATGTTAATTATGGTGAAGTGTACAACATCAATGCTTATGATCAACCAAGAAGCTATAATAATACATTTATAAGTGGTGAAAGTGGAATCATAAGAAGGACCCGACCGGCAAGAGACGAACAATTAAAGCCAAATTCGAATCAAGGTAATGCTGAAAGGAGAATTCGTTTGGGAAATGCGGGACATGGCTCAAACAGGAGTAGTAAGCAAGAACAGCATAGTTCAAAACCAATCACTGCAGTGGAGAAGAAAGCTGCAGAAAATCATGCTGCCGATGATGAAAGTTCTACTGGAACCACTCACACGTATAAAAAGAGGAAGGCATCCAAGTCAGTTGTCCATAGAAATATTTCTGTATTGCTAGGAAGGGTGCGTGCGCCTTTCAGATCAAAGAATTCCTCCTCCAACTGCGCCTTGTGGTCTTCCGTTTTTGTAGTTTCTGCCTCTGTACTGGTTTCATTAGTAGCATTTACTAACATATGGGGATGTATTAAATTTTAA 1764 0.4184 MGSLDCVPSLEDGTAVLSLNSLPLGFRFRPTDEELIDYYLRSKINGNGDEVWVIREIDVCKWEPWDMPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGTLLIGMKKTLVFYSGRAPKGKRTNWVMHEYRPTLQELDGTNPGQSPYVLCRLFKKNDESIEASNCGEVEQTNSAPMAANYSPEEIQSNPAPITASTSQVTEEDKQLAIIPDIYEETISDAINSVECHSDGYGAHDVQKQIEKLVAEEDHALNFDIYYNPKDGLLLDDRLYSPVLAHMPPEFDYQANSESDGQCGLQYGTNEINISDFLDSNLNWDQIPCEESSNYQQNFPLLLNVKDNGSGSDSDAEVANMMTCTQAVYPHEVIDRRIPFTTTPSFCRTFDYNGGDQKSDVVLLQNKFQTTFPSDVNYGEVYNINAYDQPRSYNNTFISGESGIIRRTRPARDEQLKPNSNQGNAERRIRLGNAGHGSNRSSKQEQHSSKPITAVEKKAAENHAADDESSTGTTHTYKKRKASKSVVHRNISVLLGRVRAPFRSKNSSSNCALWSSVFVVSASVLVSLVAFTNIWGCIKF* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1655 587 SUPERFAMILY NAC domain 16 172 IPR036093 GO:0003677|GO:0006355
Psa5g1655 587 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 17 477 - -
Psa5g1655 587 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 477 - -
Psa5g1655 587 MobiDBLite consensus disorder prediction 482 496 - -
Psa5g1655 587 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Psa5g1655 587 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Psa5g1655 587 MobiDBLite consensus disorder prediction 451 530 - -
Psa5g1655 587 MobiDBLite consensus disorder prediction 497 512 - -
Psa5g1655 587 Gene3D NAC domain 31 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1655 Psa-Chr5 129744004 129747324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1655 7 555 NAC Transcription Factor Family AT1G33060 36.424 7.25e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa5g1655 NAM 4.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1655 - - gmx:100777071 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1655 5 129744004 129747324 Psa5g1655 5 129744004 129747324 ECH