Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1639 ATGAGAGACAGTGTAGAGTTGGCTGGAGGGCTTGGTTATGATGTTCCTGCAGGAAGAAGAGATGGGAAGATATCACTAGCATCAGATACAAGAACAGATTTACCTCCTCCAACTTTCAATGTTAACCAACTCACTCAACTCTTTGCAAAGAAGGGGTTAACACAAAATGAAATGGTCACTCTCTCTGGAGCACACACCATTGGACGCGCTCATTGTTCTGCTTTCAGCAACAGATTATACAACTTCAGCAGCATTTCAAGGCAGGATCCAAGTTTACATCCCTCATATGTTGCACTATTGAAAAGGCAGTGTCCACAAGGAAACACAAACCCAAACTTGGTGGTACCAATGGACCCTTCTAGCCCTGGAACTGCAGATGTAGGGTACTATATTGATATCTTGGCAAATAGAGGCTTATTCACATCTGACCAGACTCTCTTAACTACCACTGGAACAGCCAGACAAGTTAATCAAAATGCTAGGAATCCCTATCTATGGGCAAACAAGTTTGCAGATGCAATGGTGAAGATGGGACAAATTGGCGTCTTAACAGGCAATACTGGGGAGATTCGAACAAATTGCAGGGTGGTCAACAGCTAG 600 0.4367 MRDSVELAGGLGYDVPAGRRDGKISLASDTRTDLPPPTFNVNQLTQLFAKKGLTQNEMVTLSGAHTIGRAHCSAFSNRLYNFSSISRQDPSLHPSYVALLKRQCPQGNTNPNLVVPMDPSSPGTADVGYYIDILANRGLFTSDQTLLTTTGTARQVNQNARNPYLWANKFADAMVKMGQIGVLTGNTGEIRTNCRVVNS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1639 199 Pfam Peroxidase 2 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 SUPERFAMILY Heme-dependent peroxidases 2 198 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 PRINTS Haem peroxidase superfamily signature 9 21 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 PRINTS Haem peroxidase superfamily signature 57 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 CDD secretory_peroxidase 2 197 IPR033905 GO:0004601|GO:0042744
Psa5g1639 199 Gene3D - 2 198 - -
Psa5g1639 199 PANTHER PEROXIDASE 25-RELATED 2 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 PANTHER PEROXIDASE 2 195 - -
Psa5g1639 199 PRINTS Plant peroxidase signature 9 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 PRINTS Plant peroxidase signature 56 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 PRINTS Plant peroxidase signature 116 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 PRINTS Plant peroxidase signature 132 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 PRINTS Plant peroxidase signature 172 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 ProSiteProfiles Plant heme peroxidase family profile. 1 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1639 199 Gene3D Peroxidase, domain 2 35 177 - -
Psa5g1639 199 ProSitePatterns Peroxidases proximal heme-ligand signature. 57 67 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1639 Psa-Chr5 127622362 127623470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1639 2 198 Peroxidase AT4G30170 46.701 1.43e-58 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1639 K00430 - gmx:100779031 333.954