Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1624 ATGAAGTTGAAATTCTCTAATGTTGCTCTTGTTCTATTAATCACGTCACTGTCTCTCTTTAGTTTGATTGTAGCTGATTCTGACTTGAACTCGGACCGACAAGCTCTATTGGAGTTTGCTTCTTCTGTTCCACACGCACCGAGGCTCAACTGGAATGACTCATCTTCAATTTGTACTTCATGGACTGGTGTGACTTGCAACTCAAACCGAACTCGTGTCGTAGGCATCCATCTTCCAGGAATCGGATTAACCGGTTCAATTCCGGAGAACACAATAGGAAAACTAGATGCTCTTAGAGTTCTAAGCCTTCATTCCAACGGTCTTAGAGGGAATCTTCCTTCTAACATCCTTTCCATTCCTTCCCTCCAATTTGCACATCTGCAGAAAAACAACTTCTCAGGTCTAATTCCGTCTTCCGTCTCTCCTAAACTAGTTGTATTCGATATTTCCTTTAACTCCTTCTCTGGTATTATACCATCCGAGTTTCAGAACCTGAGAAGACTCACTTGGTTTTATCTCCAAAACAATTCTATATCGGGTCCTATCCCCGACTTCAACCTCCCAAGTCTCAAATACTTGAATTTGAGCTATAATAACTTGAACGGTTCGATTCCAAATTCCATCAAAACATTCCCGTCTACTTCTTTTCTTGGAAACTCTCTCTTATGTGGTCCACCTCTTCTCAGTAATTGCTCTTCAATCTCTCCTTCTCCATCTCCTTCCCCTACACTCACACAAAACCAAAAAGATACGACGACCCGTAAGAAAAGCTTTGGCATAGCAGCTATACTTGCTCTAGTCATTGGAGGAATCGCCTTACTATCTCTACTAGTGTTAGTGTTCTTTGTATGCTTCCTTAAGAAGAAAAACAATAAAAGAAGCGGCATACTGAAAGGAAAAGCTTCTTCTTGCGCTGGAAAGACTGAAGTTTCGAAGAGTTTTGGAAGTGGAGTGCAGGCTGCTGAAAAGAACAAGTTGTTTTTCTTTGAAGGTTCTTCTTATACCTTTGACCTTGAAGATCTACTAAAGGCTTCTGCTGAAGTTCTCGGTAAAGGGAGCTATGGTACAGCGTACAAGGCAGTTTTGGAGGAGGGGGTGACAATGGTGGTTAAAAGGTTGAAGGAAGTTGTGGTAGGAAAGAAGGAGTTTGAACAACAGTTGGATATTGTCGGGAGATTCGGACGCCACCCTAATGTCATGCCGCTTAGAGCTTATTACTATTCCAAAGATGAGAAACTTTTGGTTTACAATTACATGCCGGGAGGCAGCTTGTTTTTCTTGTTGCATGGAAACAAAGGCGCAGGAAGAACACCATTTGATTGGGATTCAAGAGTAAAAGTCGCACTCGGAACAGCTAAAGGAATTGCTTTCATTCACTCAGAAGGAGGTTCGAAATTTACACACGGAAACATAAAATCAACCAATGTACTAATAACACAAGAATTGGATAGCTGCATTTCTGATGTTGGACTACCTCCTCTGATGAACGCGCCAGCAACAATGTCGAGAGCAAACGGGTATAGAGCTCCAGAAGTAACCGATTCCAAAAAGATCACACAGAAGTCCGACGTATACAGCTTCGGCGTGCTGCTACTTGAAATGCTAACAGGAAAGACTCCACTAAGGTATCCTGGTTATGAGGATGTTGTTGATCTTCCGAGATGGGTTAAGTCCGTTGTGAGAGAGGAATGGACAGCTGAAGTATTCGATGAAGAACTTCTTAGAGGACAATATGTTGAAGAGGAAATGGTTCAGATGCTTCAGATTGCACTTGCGTGTGTCGGTAACACGCCCGATATGAGGCCGAGAATGGATGAAGCTGTTAGAATGATAGAGGAAATTAAACATCCTGAGTTTAAGAACAGGACATCCTCGGAGTCTGAATATTCTAATCTGCAAACACCATAA 1908 0.4219 MKLKFSNVALVLLITSLSLFSLIVADSDLNSDRQALLEFASSVPHAPRLNWNDSSSICTSWTGVTCNSNRTRVVGIHLPGIGLTGSIPENTIGKLDALRVLSLHSNGLRGNLPSNILSIPSLQFAHLQKNNFSGLIPSSVSPKLVVFDISFNSFSGIIPSEFQNLRRLTWFYLQNNSISGPIPDFNLPSLKYLNLSYNNLNGSIPNSIKTFPSTSFLGNSLLCGPPLLSNCSSISPSPSPSPTLTQNQKDTTTRKKSFGIAAILALVIGGIALLSLLVLVFFVCFLKKKNNKRSGILKGKASSCAGKTEVSKSFGSGVQAAEKNKLFFFEGSSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGVTMVVKRLKEVVVGKKEFEQQLDIVGRFGRHPNVMPLRAYYYSKDEKLLVYNYMPGGSLFFLLHGNKGAGRTPFDWDSRVKVALGTAKGIAFIHSEGGSKFTHGNIKSTNVLITQELDSCISDVGLPPLMNAPATMSRANGYRAPEVTDSKKITQKSDVYSFGVLLLEMLTGKTPLRYPGYEDVVDLPRWVKSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVGNTPDMRPRMDEAVRMIEEIKHPEFKNRTSSESEYSNLQTP* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1624 635 Gene3D Ribonuclease Inhibitor 30 142 IPR032675 -
Psa5g1624 635 SUPERFAMILY Protein kinase-like (PK-like) 347 614 IPR011009 -
Psa5g1624 635 PANTHER OS05G0588300 PROTEIN 3 634 - -
Psa5g1624 635 SUPERFAMILY L domain-like 34 228 - -
Psa5g1624 635 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1624 635 Gene3D Phosphorylase Kinase; domain 1 308 418 - -
Psa5g1624 635 Gene3D Transferase(Phosphotransferase) domain 1 419 633 - -
Psa5g1624 635 ProSitePatterns Protein kinases ATP-binding region signature. 349 380 IPR017441 GO:0005524
Psa5g1624 635 PANTHER RECEPTOR-LIKE KINASE 3 634 - -
Psa5g1624 635 Pfam Protein kinase domain 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1624 635 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Psa5g1624 635 Pfam Leucine rich repeat 126 178 IPR001611 GO:0005515
Psa5g1624 635 Gene3D Ribonuclease Inhibitor 143 233 IPR032675 -
Psa5g1624 635 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1624 Psa-Chr5 127318154 127320469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1624 25 615 Receptor kinase-like Gene Family AT5G58300 60.302 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa5g1624 Pkinase 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1624 - - aprc:113868460 963.755