Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1614 ATGTCGTCTCCGTTCCACCGTCGATCTCAATCGGAGGTACATTTCCGAATCCCCGACGACTTCGACCTTGAAATGGATCCCTTCGACTTCGACGCTTCCCCGCTCCATTTCCAAGATCCACAACCACACGACGATCTCCTCTCTTCCTACATTGATTCCGAGAATTCCGGATCCAAACTCAATTCTCCTCCTGCCAATGGAGACACCGGCAGGCCCGGTCACCGCCGTAGCAACTCCGCCGATACATCTTCTTCCATGTTATCGGAAGGAATCGAATCTAAGAAGGCTATGTCCCCTGATAAACTCGCCCAATTGTGGACCGTTGATCCCAAACGAGCCAAGAGGATTCTGGCGAATCGTCAATCTGCTGCACGTTCGAAAGAGAGGAAAGCTTGTTATGTTGTTGAGCTTGAGAGAAAAATTCATACTCTTCAAACTGAAGCAACGACTCTTTCTGCTCAATTAAATCTTTTTCAGAGAGATACAAGTGGTCTGTCTAGTGAAAATACCGAGCTGAAGCTTAGGTTACAAGGCATGGAGCAACAAGCTAAGTTATGTGATGTTGATAGGCTGAAGGTTGCTACTGGAGAGCCACAACATGGTCAGAACGAACTTCGAGCCATGCAAATGCAGCAGTTTCATCATTCATTCCCATCTAACATATCCTCTCCCCACCAGCCTCAGTTTGATCTACCCACTTCATATGATTTGTCAGAAATGCTGTCAAGTGATTCTATCGGCCAGTTTCAGGGGCTGGACATTGGCCACAGGGTTTCTCATGTTCTGATGCCTGATGGTCCCTCCATTTCTGTTAATAAAACCAACAACGCCTTTTGA 837 0.4707 MSSPFHRRSQSEVHFRIPDDFDLEMDPFDFDASPLHFQDPQPHDDLLSSYIDSENSGSKLNSPPANGDTGRPGHRRSNSADTSSSMLSEGIESKKAMSPDKLAQLWTVDPKRAKRILANRQSAARSKERKACYVVELERKIHTLQTEATTLSAQLNLFQRDTSGLSSENTELKLRLQGMEQQAKLCDVDRLKVATGEPQHGQNELRAMQMQQFHHSFPSNISSPHQPQFDLPTSYDLSEMLSSDSIGQFQGLDIGHRVSHVLMPDGPSISVNKTNNAF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1614 278 Gene3D - 110 163 - -
Psa5g1614 278 MobiDBLite consensus disorder prediction 48 65 - -
Psa5g1614 278 Pfam bZIP transcription factor 111 169 IPR004827 GO:0003700|GO:0006355
Psa5g1614 278 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
Psa5g1614 278 Coils Coil 134 154 - -
Psa5g1614 278 MobiDBLite consensus disorder prediction 32 98 - -
Psa5g1614 278 CDD bZIP_plant_RF2 112 161 IPR044759 GO:0003700|GO:0006355
Psa5g1614 278 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 172 IPR004827 GO:0003700|GO:0006355
Psa5g1614 278 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 2 199 - -
Psa5g1614 278 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 205 274 - -
Psa5g1614 278 MobiDBLite consensus disorder prediction 72 91 - -
Psa5g1614 278 PANTHER BZIP TRANSCRIPTION FACTOR 18 2 199 - -
Psa5g1614 278 PANTHER BZIP TRANSCRIPTION FACTOR 18 205 274 - -
Psa5g1614 278 SUPERFAMILY Leucine zipper domain 111 164 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1614 Psa-Chr5 126632006 126634416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1614 4 254 bZIP Transcription Factor Family AT2G40620 46.130 9.94e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g1614 bZIP_1 1.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1614 - - gmx:100807712 317.775