Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1599 ATGGCTTCTGCTTCATCTTCAACTTCTTCAAATTGGGTCATGGAAAGTGGTGACATTCCTCATGTTCTAGCTGTTGATGATAGTCTTATTGATCGAAAACTTGTTGAGAAACTCCTTAGAAATTCCTCTTGCAAAGTTACAACTGCTGAAAATGGGCTTAGGGCATTGGAGTTATTGGGCTTGACAAATGGTGAACAAAACACCTTGAATGGAAGATCCAAAGTAAATTTAATCATAACAGACTATTGCATGCCAGGGATGACAGGCTATGAGTTACTTAAGAAAATTAAGCAATCATCTGTAATGAGGGAGGTTCCAGTAGTAATCATGTCATCTGAGAACATACCAACAAGAATCAACAAGTGTCTAGAAGAAGGAGCTGAAATGTTCATGTTAAAGCCACTCAAACAATCTGATGTAAGAGAACTGACATGTCAGTTAATGAATCTGGGAAGGTGA 459 0.3813 MASASSSTSSNWVMESGDIPHVLAVDDSLIDRKLVEKLLRNSSCKVTTAENGLRALELLGLTNGEQNTLNGRSKVNLIITDYCMPGMTGYELLKKIKQSSVMREVPVVIMSSENIPTRINKCLEEGAEMFMLKPLKQSDVRELTCQLMNLGR* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1599 152 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 150 IPR045279 GO:0009736
Psa5g1599 152 ProSiteProfiles Response regulatory domain profile. 21 148 IPR001789 GO:0000160
Psa5g1599 152 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 9 150 - -
Psa5g1599 152 CDD REC_typeA_ARR 22 143 - -
Psa5g1599 152 Pfam Response regulator receiver domain 22 142 IPR001789 GO:0000160
Psa5g1599 152 Gene3D - 21 152 - -
Psa5g1599 152 SUPERFAMILY CheY-like 20 149 IPR011006 -
Psa5g1599 152 SMART REC_2 20 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1599 Psa-Chr5 125721528 125722566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1599 21 149 Response Regulator Gene Family AT3G56380 74.046 3.88e-64 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa5g1599 Response_reg 9e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1599 K14492 - gmx:100499827 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1599 5 125721528 125722566 Psa5g1599 5 125721528 125722566 ECH