Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1597 ATTGCCTCCGATCTCAACACTCATGTTTCTACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCAGCAAGTGGAAAACTTACAGACAAATCAGATGTTTTCTCTTATGGAGTCATGCTCCTTGAGCTATTAACTGGACGTCGACCGGCTAGGCCTTTGCTCATGCGTGCTTTAGAAGAAAATAATTTAGATTCTCTGATTGATCCAAGACTTCAGAATGAATTTGACCCTAGTGAGATGACGCGTATGGTAGCATGTGCTGCAGCTGCACACGCCACTCAGCAAAGCGTCGACCAAGGATGA 312 0.4551 IASDLNTHVSTRVMGTFGYLAPEYAASGKLTDKSDVFSYGVMLLELLTGRRPARPLLMRALEENNLDSLIDPRLQNEFDPSEMTRMVACAAAAHATQQSVDQG* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1597 103 Gene3D Transferase(Phosphotransferase) domain 1 1 100 - -
Psa5g1597 103 Pfam Protein kinase domain 3 55 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1597 103 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1597 103 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK1 2 93 - -
Psa5g1597 103 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 2 93 - -
Psa5g1597 103 SUPERFAMILY Protein kinase-like (PK-like) 5 87 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1597 Psa-Chr5 125586289 125587334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1597 4 92 Trihelix Transcription Factor Family AT5G38560 60.577 1.55e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Psa5g1597 Pkinase 1.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1597 - - gmx:100781944 142.51