Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1586 ATGACGTTTAAGCGCAGGAATGGTGGTCGTAACAAACATGGCCGTGGCCATGTCAAATTCATCCGTTGCTCAAACTGTGGAAAATGCTGCCCTAAGGATAAGGCTATCAAGCGTTTTCTTGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTTCAGGAAGCTTGTGTTTATGATCAATACACTCTTCCTAAGCTGTATGTCAAGATGCAATACTGCGTGTCTTGTGCCATCCACTCTCATGTTGTGAGGGTCAGATCTCGCACTGACAGGAGGAAGCGTGACCCTCCTCAGCGTTTCATTAGGCGCAGGGATGATGCACCAAGACCTGGCCAACCCGGTCAAGCTCCTCGCCCTGCTGGACCTGGAGCTCCCCCAGCCCGTACCTAG 393 0.5115 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGPGAPPART* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1586 130 MobiDBLite consensus disorder prediction 85 130 - -
Psa5g1586 130 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Psa5g1586 130 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Psa5g1586 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 - -
Psa5g1586 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 IPR000892 GO:0003735|GO:0005840|GO:0006412
Psa5g1586 130 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Psa5g1586 130 MobiDBLite consensus disorder prediction 113 130 - -
Psa5g1586 130 MobiDBLite consensus disorder prediction 90 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1586 Psa-Chr5 124978715 124981196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1586 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 4.95e-69 202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1586 5 124978715 124981196 Psa5g1586 5 124978715 124981196 ECH