Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1581 ATGGGAACTGTTAGTAACATTGGTTTCTCTTCGTTATTCAGAGTTTCTTTGAACGCAGACCTACTTTCAAAACAAAGGAAACACATATCGCCATGCAGTTTTACGGTTCCCCTGAACTACTCTGTTAGGGTGAACAAAATCTGCTGTAAACTATCAGAAAGTGGGATTGAAGTATCTAAATCTAAGGATATGATGGAAGAATACAATATAGCTATGAAGAACATGATGAGGAATCCTTATGAGTATCATCACGATCTGGGTATGAATTATACGGTTATAACTGATAATTTGATTGTGGGGTCCCAACCACAGAAACCTGAAGATGTAGATCATCTTAAGAATGAAGAAGGTGTGGCCTACATTCTAAACTTGCAACAGGATAAAGATGCTGAGTTTTGGGGAATAGACTTGCAGTCAATAATAAAAAGGTGTCGCGAAATTGAAATTCGGCACATGAGGAGACCGGCAGTAGACTTTGATCCAAACTCTTTGCGAAGTGCGCTGCCTAAAGCAGTTTCATCTTTGGAATGGGCGATTTCGGAGGGAAAGGGGAAAGTTTATGTGCATTGTACTGCAGGACTTGGAAGAGCTCCAGCAGTAGCAATATCTTATTTGTTTTGGTTTTGTGACATGAATCTAAATGAAGCATATGATATGCTAACTTCAAAGAGACCTTGCGGACCGAATAAAAAAGCGATACGTGGAGCTACTTATGATCTGGCTAAGAATGATCCATGGAAGGAGCCGTTTGAGAGTCTTCCAGACCATGCTTTTGGGGATATAGCAGACTGGGAGAGGAACCTGATTCAAAATGGTGTCCGCGCTCTTCGTGGAACTTGA 840 0.4095 MGTVSNIGFSSLFRVSLNADLLSKQRKHISPCSFTVPLNYSVRVNKICCKLSESGIEVSKSKDMMEEYNIAMKNMMRNPYEYHHDLGMNYTVITDNLIVGSQPQKPEDVDHLKNEEGVAYILNLQQDKDAEFWGIDLQSIIKRCREIEIRHMRRPAVDFDPNSLRSALPKAVSSLEWAISEGKGKVYVHCTAGLGRAPAVAISYLFWFCDMNLNEAYDMLTSKRPCGPNKKAIRGATYDLAKNDPWKEPFESLPDHAFGDIADWERNLIQNGVRALRGT* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1581 279 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 231 IPR029021 -
Psa5g1581 279 CDD DSP_laforin-like 88 235 IPR045204 GO:0019203|GO:0046838
Psa5g1581 279 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 3 279 - -
Psa5g1581 279 Gene3D Protein tyrosine phosphatase superfamily 72 279 IPR029021 -
Psa5g1581 279 Pfam Dual specificity phosphatase, catalytic domain 110 229 IPR000340 GO:0008138|GO:0016311
Psa5g1581 279 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 3 279 - -
Psa5g1581 279 SMART dsp_5 89 231 IPR020422 GO:0006470|GO:0008138
Psa5g1581 279 ProSiteProfiles Dual specificity protein phosphatase domain profile. 89 246 IPR020422 GO:0006470|GO:0008138
Psa5g1581 279 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 166 225 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1581 Psa-Chr5 124420596 124422945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1581 35 279 Protein tyrosine phosphatase (PTP) family AT3G10940 72.800 1.81e-139 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1581 - - gmx:100805592 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1581 5 124420596 124422945 Psa5g1581 5 124420596 124422945 ECH