Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1573 ATGTCTAGATTAACCAAGATCACTCTCTTTGTCCTTGTCATAATTGGAAGTGCCAATGCGCAACTTTCTACAAACTTTTATTCAAGTTCTTGTCCTAAATTATCTTCCACCGTAAAATCCTCAGTGCAGTCCGCTATATCAAAGGAGACTCGAATTGGTGCTTCCATCCTTCGTTTGTTCTTTCACGATTGTTTTGTCAACGGATGTGATGGATCAATTCTATTGGATGACACATCAAGTTTTACCGCGGAGAAGAACGCTAACCCTAATAGAAACTCTGCTCGTGGATTCGAAGTTATCGATAACATAAAAACAGCCGTAGAGAATGCATGTCCCGGAGTTGTATCTTGTGCTGATATCCTTGCCATTGCTGCTGCAGACTCCGTCGCAATCCTTGGAGGCCCAACATGGAATGTAAAACTTGGAAGAAGAGACGCAAAAACAGCTAGTCAATCTGCGGCTAACACAGGAATTCCAGCACCTACTTCCAACCTCAACCAACTTACCTCAAGATTCAGTGCTCTTGGCCTTTCAACCAAAGACTTAGTCGCATTGTCAGGTGCGCACACAATTGGACAAGCAAGGTGCACAAACTTTAGGGCAAGAATCTACAACGAGACAAACATAGATACTTCTTTTGCTACTACGAGACAATCGAACTGCCCAAAAGCATCAGGGTCAGGAGACAACAATTTGGCACCCTTAGATCTTCAAACTCCAACTTCTTTCGATAACAACTACTTCAAGAACCTTGTTCAAAAGAAAGGTCTTCTCCATTCTGATCAACAACTTTTCAATGGTGGATCCACCAACTCCATAGTGAGTGGCTATAGCACTAATCCAAGCTCTTTTTCCTCTGATTTTGCCGCTGCTATGATCAAAATGGGAGATATAAGTCCTCTCACTGGATCTAATGGGGAGATCAGGAAGAATTGTAGAAGAAAAAACTAA 951 0.4217 MSRLTKITLFVLVIIGSANAQLSTNFYSSSCPKLSSTVKSSVQSAISKETRIGASILRLFFHDCFVNGCDGSILLDDTSSFTAEKNANPNRNSARGFEVIDNIKTAVENACPGVVSCADILAIAAADSVAILGGPTWNVKLGRRDAKTASQSAANTGIPAPTSNLNQLTSRFSALGLSTKDLVALSGAHTIGQARCTNFRARIYNETNIDTSFATTRQSNCPKASGSGDNNLAPLDLQTPTSFDNNYFKNLVQKKGLLHSDQQLFNGGSTNSIVSGYSTNPSSFSSDFAAAMIKMGDISPLTGSNGEIRKNCRRKN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1573 316 SUPERFAMILY Heme-dependent peroxidases 21 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PANTHER PEROXIDASE 10 314 - -
Psa5g1573 316 Pfam Peroxidase 38 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 Gene3D - 25 313 - -
Psa5g1573 316 CDD secretory_peroxidase 21 314 IPR033905 GO:0004601|GO:0042744
Psa5g1573 316 Gene3D Peroxidase, domain 2 159 295 - -
Psa5g1573 316 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Psa5g1573 316 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PANTHER PEROXIDASE 72-RELATED 10 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 ProSiteProfiles Plant heme peroxidase family profile. 21 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Psa5g1573 316 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1573 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1573 Psa-Chr5 123973055 123974946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1573 20 316 Peroxidase AT5G05340 79.461 8.26e-179 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1573 K00430 - gmx:100803637 547.74