Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1565 ACCTCACCTCTACCCCTCTCAACACAAATCTCACCGTCGTCGCCACTTACCTTCTCACCCTCGACCACCTTCAAGTCCTCACCTTAAAATCCTCAAACATCACTTCTTCTCCCATTTCACTCTCCCACACCAAGTGCACTTCCTCACTCACCACCATAGATCTATCACAGAACACTATATCCTCATCTTTCTCCGACTTGGCCTTTCTCTCTTCATGCTCCGGTCTTAAATCTCTTAACCTTTCCAACAACCAGCTCGACTTTGATTCTCCCAAATGGACTCTCAGTTCGTCTCTCCGGTTACTTGACGTTTCCGACAACAAGATTTCCGGCCCCGGATTCTTCCCTTGGATCCTAAACCATGAGTTAGAGTTTTTATCTCTCAGAGGAAATAAAGTAACAGGAGAAACCGACTTCTCCGGTTACACTACTCTCCGGTATCTAGATATTTCCTCTAATAATTTCACTGTCTCTATACCTTCTTTCGGGGACTGTTCCTCTCTCCAACACCTCGATATCTCTGCAAATAAATACTTCGGCGACATTACCAGAACTCTCTCCCCTTGCAAAAACCTCCTCCATCTCAACCTCTCCGGCAACCAGTTCACCGGTCCGGTTCCTTCTCTTCCTTCTGGTTCCCTACAGTTCCTCTACCTCGCTGAAAACCACTTCGCCGGGAAAATCCCGGCGCGTCTGGCTGACCTCTGCTCAACTCTCGTCGAACTCGATCTCTCCTCCAACAACCTCACCGGTCCAATCCCACGCGAGTTCGGCGCGTGCACTTCGGTTACATCGTTTGACATATCGAGCAACAAGTTCGCCGGTGAACTTCCGATGGAGGTTTTAACTGAGATGAATAGTTTGAAAGAACTGACGGTGGCGTTTAACGAATTTGCGGGTCCACTGCCAGAGTCGCTGTCGAAGCTAACGGGCTTAGAATCGTTAGATCTGAGTTCGAATAACTTCAGCGGAACGATTCCGAGGTGGCTTTGCGGGGAAGAATCAGGGAATAATTTGAAGGGACTTTACCTACAAAATAACGTTTTCACGGGTTTTATTCCACCAACGCTTAGTAACTGTTCTAACCTCGTTGCTCTTGATTTGAGCTTCAATTACCTCACGGGAACCATTCCTCCGAGTTTAGGTTCGCTTTCGAAGCTTCGCGATTTAATCATGTGGTTGAATCAGCTTCACGGTGAAATTCCTCAAGAGCTTTCAAACATGGAGAGTCTCGAGAATTTGATTCTTGATTTTAATGAGTTGAGTGGAACCATTCCTTCAGGGCTTGTGAATTGCACCAAGCTAAATTGGATCTCGCTGTCGAACAACAGGCTTACCGGAGAGATTCCGTCGTGGATTGGAAAGCTTTCGAATCTTGCTATATTGAAGCTGAGCAATAACTCGTTCTCCGGGAGGATTCCACCGGAGTTGGGAGATTGCCCTAGCTTGATATGGTTGGATCTGAACACGAATTTCCTTACAGGACCGATACCTCCGGAGTTGGGGAAGCAGTCAGGGAAAGTTGTGGTTAATTTCATCAGTGGGAAGACGTATGTTTACATTAAAAACGACGGTAGTAAAGAGTGTCATGGAGCTGGGAGCTTGCTGGAATTTGCAGGGATTAATCAGGAACAATTGGGGAGAATTTCAACAAGGAACCCTTGCAATTTCACTAGGGTTTATGGAGGTAAGCTTCAACCCACGTTTACGCTTAACGGCTCGATGATCTTTTTGGATGTTTCACACAACATGTTGTCTGGTACTATTCCTAAGGAAATTGGTGAAATGACATATCTCTATGTTTTGCATTTGAGTCATAATAATCTATCTGGTAGCATTCCTCAAGAGCTTGGTAAGATGAAGAATCTCAATATTCTCGATCTTTCTTACAATAAGTTACAAGATCAAATTCCACAAACCTTAACAAGGCTTTCATTGCTCACTGAGATTGACTTCTCCAACAATTGTCTCTCTGGAATGATTCCGGAATCTGGTCAATTTGACACGTTTCCGGTTGGTAAGTTCCTGAACAACTCTGGTCTCTGCGGTGTTCCTCTTCCACCGTGTGGGTCGGACTCGGGAGGGGGTGCGGGTTCGCAGCATAAGTCTCATAGGAGACAGGCGTCTCTTGCAGGGAGTGTGGCAATGGGATTGCTTTTCTCTCTTTTCTGTGTTTTCGGTTTGATCATTATTGCTATTGAGACGAGAAAGAGGAGGAAGAAAAAGGAGGCCGCTATTGATGGCTACATTGACAATTCGCATTCTGGCAATGCCAATAATTCTGGCTGGAAATTGACCAGTGCCCGCGAAGCTCTCAGCATTAACCTTGCAACGTTTGAAAAGCCACTTCGAAAGCTCACTTTCGCAGATCTTCTAGCAGCAACCAATGGCTTTCACAATGACAGTCTCATTGGTTCGGGTGGTTTCGGCGATGTCTATAAAGCTCAGTTGAAAGATGGAAGTGTCGTGGCCATCAAGAAGCTGATACATGTAAGTGGACAAGGGGACAGAGAATTCACAGCTGAAATGGAAACCATTGGGAAAATTAAGCACAGAAACCTTGTTCCTCTTCTGGGATACTGCAAAGTTGGAGAGGAAAGGCTGTTGGTTTACGAGTACATGAAATATGGAAGTCTAGAAGATGTCCTGCACGACCCGAAGAAAGCTGGAATCAAGATGAATTGGCTTATGAGTGCTATGGATACACATTTGAGCGTAAGCACATTGGCAGGCACGCCGGGTTATGTTCCTCCCGAATACTATCAGAGCTTTAGATGCTCCACTAAAGGCGACGTTTATAGTTATGGTGTAGTTTTGCTGGAGTTGCTGACGGGGAAACGACCAACCGATTCAGCTGATTTTGGCGATAACAATCTTGTCGGATGGGTTAAACAACATGCCAAACTTAAAATAAGTGATGTTTTTGATAAAGAGCTTATGAAAGAAGACCCCAATTTGGAGATTGAGCTTTTGCAGCATTTAAAGGTAGCTTGTGCTTGTTTGGATGATAGACCTTGGAGGAGACCTACAATGATTCAAGTCATGACAATGTTCAAGGAAATACAAGCAGGTTCAGGAATGGATTCTCAGTCTACTATAGCCGCCGAAGACGAAGGCTTCAACGCCATCGAAATGGTTGAAATGAGCATAAAAGAAGTCCCTGAATTAATCAAGCATTAA 3179 0.4508 LTSTPLNTNLTVVATYLLTLDHLQVLTLKSSNITSSPISLSHTKCTSSLTTIDLSQNTISSSFSDLAFLSSCSGLKSLNLSNNQLDFDSPKWTLSSSLRLLDVSDNKISGPGFFPWILNHELEFLSLRGNKVTGETDFSGYTTLRYLDISSNNFTVSIPSFGDCSSLQHLDISANKYFGDITRTLSPCKNLLHLNLSGNQFTGPVPSLPSGSLQFLYLAENHFAGKIPARLADLCSTLVELDLSSNNLTGPIPREFGACTSVTSFDISSNKFAGELPMEVLTEMNSLKELTVAFNEFAGPLPESLSKLTGLESLDLSSNNFSGTIPRWLCGEESGNNLKGLYLQNNVFTGFIPPTLSNCSNLVALDLSFNYLTGTIPPSLGSLSKLRDLIMWLNQLHGEIPQELSNMESLENLILDFNELSGTIPSGLVNCTKLNWISLSNNRLTGEIPSWIGKLSNLAILKLSNNSFSGRIPPELGDCPSLIWLDLNTNFLTGPIPPELGKQSGKVVVNFISGKTYVYIKNDGSKECHGAGSLLEFAGINQEQLGRISTRNPCNFTRVYGGKLQPTFTLNGSMIFLDVSHNMLSGTIPKEIGEMTYLYVLHLSHNNLSGSIPQELGKMKNLNILDLSYNKLQDQIPQTLTRLSLLTEIDFSNNCLSGMIPESGQFDTFPVGKFLNNSGLCGVPLPPCGSDSGGGAGSQHKSHRRQASLAGSVAMGLLFSLFCVFGLIIIAIETRKRRKKKEAAIDGYIDNSHSGNANNSGWKLTSAREALSINLATFEKPLRKLTFADLLAATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKAGIKMNWLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDKELMKEDPNLEIELLQHLKVACACLDDRPWRRPTMIQVMTMFKEIQAGSGMDSQSTIAAEDEGFNAIEMVEMSIKEVPELIKH* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1565 1058 Gene3D Ribonuclease Inhibitor 1 688 IPR032675 -
Psa5g1565 1058 ProSiteProfiles Protein kinase domain profile. 797 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g1565 1058 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 895 1032 - -
Psa5g1565 1058 SUPERFAMILY Protein kinase-like (PK-like) 779 1020 IPR011009 -
Psa5g1565 1058 SUPERFAMILY L domain-like 15 354 - -
Psa5g1565 1058 ProSiteProfiles Leucine-rich repeat profile. 48 70 IPR001611 GO:0005515
Psa5g1565 1058 Pfam Brassinosteroid receptor island domain 505 569 IPR045381 -
Psa5g1565 1058 Pfam Leucine Rich repeat 95 112 IPR001611 GO:0005515
Psa5g1565 1058 Pfam Leucine Rich repeat 235 250 IPR001611 GO:0005515
Psa5g1565 1058 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 894 - -
Psa5g1565 1058 Gene3D Transferase(Phosphotransferase) domain 1 883 1022 - -
Psa5g1565 1058 ProSitePatterns Protein kinases ATP-binding region signature. 803 826 IPR017441 GO:0005524
Psa5g1565 1058 Gene3D - 510 570 - -
Psa5g1565 1058 PRINTS Leucine-rich repeat signature 238 251 - -
Psa5g1565 1058 PRINTS Leucine-rich repeat signature 619 632 - -
Psa5g1565 1058 PANTHER SYSTEMIN RECEPTOR SR160 1 894 - -
Psa5g1565 1058 Gene3D Phosphorylase Kinase; domain 1 758 872 - -
Psa5g1565 1058 Pfam Protein tyrosine and serine/threonine kinase 800 898 IPR001245 GO:0004672|GO:0006468
Psa5g1565 1058 Pfam Leucine Rich Repeat 311 330 IPR001611 GO:0005515
Psa5g1565 1058 Pfam Leucine Rich Repeat 361 383 IPR001611 GO:0005515
Psa5g1565 1058 SMART LRR_typ_2 20 43 IPR003591 -
Psa5g1565 1058 SMART LRR_typ_2 308 332 IPR003591 -
Psa5g1565 1058 SMART LRR_typ_2 188 215 IPR003591 -
Psa5g1565 1058 SMART LRR_typ_2 455 479 IPR003591 -
Psa5g1565 1058 SMART LRR_typ_2 619 643 IPR003591 -
Psa5g1565 1058 SMART LRR_typ_2 407 431 IPR003591 -
Psa5g1565 1058 SUPERFAMILY L domain-like 226 677 - -
Psa5g1565 1058 PANTHER SYSTEMIN RECEPTOR SR160 895 1032 - -
Psa5g1565 1058 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Psa5g1565 1058 Pfam Leucine rich repeat 433 490 IPR001611 GO:0005515
Psa5g1565 1058 Pfam Protein kinase domain 899 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1565 Psa-Chr5 123211920 123215254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1565 1 1054 Receptor kinase-like Gene Family AT4G39400 65.357 0.0 1357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Psa5g1565 Pkinase 1.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1565 K13415 - gmx:100799772 1679.84