Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1557 ATGGCAGAGGGCTTCCTTGATTATTCTCATGAGGGAAAGTTGGTAGAGGATGTAGGTGATGATTGCTTTGCTGAACTTCTGTCTAGGTCCTTAATTCAACAATCAAACGATGGTGTTCGTGGAAAATTGTTTTTCATGCATGATCTCATCAACGACTTAGCCACAGCCGTGTCTGGAAGAATTTGTTGTCGGTCTGAATGTGGTGACATCTCTGAAAAGGTTCGTCATTTATCATATATTCCAGAGGAGTATGATATTTTCACGAAGTTTAGGCCTTTCTACAATTTTAAATGCTTGCGAAGCTTCCTACCCATTACTTTCTCGAGGTCATATAATTACTTATCCATCAAGGTGGTTGATGATCTGCTACCATTATTCAAAAGGTTGCGCGTGTTGTCACTATCAAAGTATGTAAACATCACCAACCTTCCGGATTCAATCGGAAATTTGGTGCAATTGCGGTATCTAGATTTGTCCTTGACTAGAATCAAAAGTTTGCCTGATACAATATGTAACCTTTATAATTTGCAGACATTGATTTTATTAGATTGCGAGTGTCTCACTGAATTGCCACTCCACATGGAAAACTTAATTAGTTTACGTCACCTTGATATAAGTGGGACTGACATAAAAGAGTTGCCTATGGAAATTGGTGGACTAGAAAACCTCCAAACTTTGACTGTTTTTTTAGTGGGTAAACGACAGGAAGGGTTAAGTATCAAAGAGCTAAGGAAATTCCCAAACCAACAAGGGAAACTTACCATAAAAAACCTATACAATGTCGTTGATGCAAAAGAGGCCGAAGATGCCAACCTGAAAAGCAAAGAGAAAATTGAGAATTTAGAGTTGATATGGGGAAAACAAAGTGAAGATTCAGTAAAAGTGAAAGTTGTGCTTGATATGTTGCAACCACCAATAAACTTGAAGAGCCTTAAAATTGACTTGTATGGTGGGACAAGTTTTCCGAGTTGGTTGGGAAATTCTTTGTTCTCTAACATGGTGTCCCTTGACATTCATAACTGTCAATACTGCATGACACTTCCAGCGCTAGGCCAACTACCTTCTCTAAAGAAGCTGAGTGTATCGGATTTGTTGTTATTAGAGACAATTGGCTCAGAATTCTATTGTGTTGAGGAAGGAGAATGTTCCAATTCTACCTTCCAACCATTTCCTTCCCTTGAGCATTTGAAATTTCACAACATGCCAAATTTGAAGGATTGGATTCCCTTTGAAAGTATAAATTTTGCATTTCCCCAACTTAGAATTATGAAGTTACATGATTGTCCTGAACTAAGGGGAGATTTGCCTAGCCACCTTTCTTGCTTGGAGGAAATTGAAATAAGAAGTTGTTATAAGCTATTGGAAACACTCCATAGTTTGAATTGGCTATCGGCAATCAAAAAACTAAGAATTGATGAAGATTTAAATTATGAAGCGTCTGCTCAAAGCACTCGAGGATTAACGTTTGAGACCGAATCTCCCTTGCAACCTGCAGCTGCTGAAAGTTACCCAATGTTTATTTCTAAAATGATCATGAGTAGTATTTCTCTTACTCAGTTATATCTCTGGAATATTCCGTCTCTCACTGCATTTCCCACAAATGGTCTACCCAATTCACTGCAGTCACTTCTTATTTTTGGGTGTGGGAACTTGTCCTTCATGCCTTTCGAAACATTTCAAAACTACACATCACTTGTGGATCTTTTTATGGGGTATAGCTGTGATTCACTTACATCATTTCCACTTGATGGTTTCCCTGTACTCCAAGAAATTACCATTTACGGTGGTAGGAGTATGAATTCCATTTTTATTTCAGAAAGTCCTTCACGTATGCAGTCAAGCCTCCGATCACTTCATATTACATGCAGGGAGTCACTTAAAGTCAATCTTAGGTTGGACACGCTCACCAATCTTGAACATCTGAGTCTTGACTGTCCTGGAAAGTTGTCATTTCATGAAGGAGTTTGTCTGCCCCCCAAATTACAATCAATTGAGATTTCTTTCCGAGGAACAAAGCCGCATGTAAAGGAATGGGGTCTCCAAGACCTAACCGCTCTTTCAAGATTGACCATTCAAGAAAAGGGTGAAATGGTTAACAACTTGACAATGGATCTGTTGCTCCCCATCTCCCTTGTGTCTCTCACTGTCCATGATAATCTTTCTTTTGATCTAAATGGGCTTCGACATCTCTCCTCTCTCGAAGATCTCAAATTTCATTTTTGTGGACATCTCAAGTCTTTGCCAGAAAACTGTCTTCCTTCCTCACTGAAATCACTTGAATTTCATTTTTGTGGACATCTCAAGTCATTACCAGAAGACGGACTTCCTACCTCTCTTAATGTACTGACCATCACGATATGCCCTTTGTTAGAAGAAAGGTATAAAAGAAAGGAAAATTGGTCCAAAATTTCTCACATTCCTGTCATAGTTATAAATTGGCAAGTCACAATATGA 2454 0.3875 MAEGFLDYSHEGKLVEDVGDDCFAELLSRSLIQQSNDGVRGKLFFMHDLINDLATAVSGRICCRSECGDISEKVRHLSYIPEEYDIFTKFRPFYNFKCLRSFLPITFSRSYNYLSIKVVDDLLPLFKRLRVLSLSKYVNITNLPDSIGNLVQLRYLDLSLTRIKSLPDTICNLYNLQTLILLDCECLTELPLHMENLISLRHLDISGTDIKELPMEIGGLENLQTLTVFLVGKRQEGLSIKELRKFPNQQGKLTIKNLYNVVDAKEAEDANLKSKEKIENLELIWGKQSEDSVKVKVVLDMLQPPINLKSLKIDLYGGTSFPSWLGNSLFSNMVSLDIHNCQYCMTLPALGQLPSLKKLSVSDLLLLETIGSEFYCVEEGECSNSTFQPFPSLEHLKFHNMPNLKDWIPFESINFAFPQLRIMKLHDCPELRGDLPSHLSCLEEIEIRSCYKLLETLHSLNWLSAIKKLRIDEDLNYEASAQSTRGLTFETESPLQPAAAESYPMFISKMIMSSISLTQLYLWNIPSLTAFPTNGLPNSLQSLLIFGCGNLSFMPFETFQNYTSLVDLFMGYSCDSLTSFPLDGFPVLQEITIYGGRSMNSIFISESPSRMQSSLRSLHITCRESLKVNLRLDTLTNLEHLSLDCPGKLSFHEGVCLPPKLQSIEISFRGTKPHVKEWGLQDLTALSRLTIQEKGEMVNNLTMDLLLPISLVSLTVHDNLSFDLNGLRHLSSLEDLKFHFCGHLKSLPENCLPSSLKSLEFHFCGHLKSLPEDGLPTSLNVLTITICPLLEERYKRKENWSKISHIPVIVINWQVTI* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1557 817 Gene3D Ribonuclease Inhibitor 500 811 IPR032675 -
Psa5g1557 817 Coils Coil 264 284 - -
Psa5g1557 817 PANTHER OS05G0414200 PROTEIN 1 552 - -
Psa5g1557 817 Gene3D Ribonuclease Inhibitor 96 493 IPR032675 -
Psa5g1557 817 SUPERFAMILY L domain-like 508 796 - -
Psa5g1557 817 SUPERFAMILY L domain-like 46 471 - -
Psa5g1557 817 SMART LRR_typ_2 197 220 IPR003591 -
Psa5g1557 817 SMART LRR_typ_2 150 173 IPR003591 -
Psa5g1557 817 PANTHER DISEASE RESISTANCE PROTEIN RP 1 552 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1557 Psa-Chr5 122015839 122019311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1557 140 306 WRKY Transcription Factor Family AT4G12020 33.333 5.06e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1557 - - mtr:MTR_3g032370 929.858