Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1555 ATGTTTAGGGATAATGGTCTTTCCATCAAGGACTTAGTCACATTATCAGGTGGTCACACAATTGGACAAGCAAGGTGCACAACCTTTAGGACAAGAATCTACAACGAGACCAACATAGATACTTCTTTTGCTACTACGAGGCAATCAAACTGTCCAAATGCAGCATGCTCTGGGGATAACAATTTGGCACCCCTTGATCTCCAGACTCCCATTTCTTTTGACAACAACTACTTCAAGAATCTTGTTCAGAACAAAGGTCTTCTCCATTCTGATCAACAACTTTTCAACGGCAGGTCTACCGATTCTATAGTGAGTGGATATAGTACTAATCCAAGTTCTTTTTCATCTGATTTTGCTGCTGCTATGATCAAGATGGGGGACATAAGTCCTCTTACAGGATCCAATGGAGAGATTAGGAAGAATTGTAGAACAACTAACTAA 441 0.4036 MFRDNGLSIKDLVTLSGGHTIGQARCTTFRTRIYNETNIDTSFATTRQSNCPNAACSGDNNLAPLDLQTPISFDNNYFKNLVQNKGLLHSDQQLFNGRSTDSIVSGYSTNPSSFSSDFAAAMIKMGDISPLTGSNGEIRKNCRTTN* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1555 146 Pfam Peroxidase 2 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1555 146 ProSiteProfiles Plant heme peroxidase family profile. 1 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1555 146 PANTHER PEROXIDASE 72-RELATED 2 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1555 146 PRINTS Plant peroxidase signature 10 22 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1555 146 PRINTS Plant peroxidase signature 64 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1555 146 PRINTS Plant peroxidase signature 80 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1555 146 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1555 146 ProSitePatterns Peroxidases proximal heme-ligand signature. 11 21 IPR019793 -
Psa5g1555 146 SUPERFAMILY Heme-dependent peroxidases 1 146 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g1555 146 Gene3D - 126 146 - -
Psa5g1555 146 Gene3D Peroxidase, domain 2 2 125 - -
Psa5g1555 146 PANTHER PEROXIDASE 2 144 - -
Psa5g1555 146 PRINTS Haem peroxidase superfamily signature 11 26 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1555 146 PRINTS Haem peroxidase superfamily signature 66 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1555 Psa-Chr5 122004541 122005081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1555 2 146 Peroxidase AT5G05340 73.793 5.01e-73 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1555 K00430 - gmx:100803637 243.432