Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1548 ATGATCATGAGTATGACTCTCTTTCTTCTCATCATACTAGGGAGTGTCAATGCACAACTTTCTACAAGTTTTTACTCAACTTCTTGTCCTAAACTATCTTCTACCGTGCAATCCACAATGCAATCTGCCATATCAAAAGAGGCTCGGATCGGTGCTTCCATTCTTCGGTTGTTCTTCCACGATTGCTTTGTCAATGGATGCGATGGATCAATTCTATTGGACGACACATCAAGTTTTACCGGGGAGAAGAACGCTAACCCTAATAGAAACTCTGCTCGTGGATTCGAAGTTATCGATAACATAAAAACAGCCGTAGAGAACGTATGTCCTGGAGTTGTATCTTGCGCTGATATTCTTGCCATTGCTGCTGCAGACTCTGTCGCAATTCTTGGAGGTCCGTCGTGGAATGTAAAACTCGGAAGAAGAGACGCAAAGACGGCCAGTCAGTCTGCTGCTAATACAGCCATCCCAGCACCAACTTCCAACCTTAACACACTTACCTCAATGTTTAGTGCCGTTGGTCTTTCCACCAAGGACTTAGTCACATTGTCAGGTGGTCACACAATTGGACAAGCAAGATGCACAACTTTTAGGACAAGAATCTACAACGAGACAAACATCGATACTTCTTTTGCTACTACGAGACAATCAAATTGTCCAAATGCAGCAGGCTCTGGGGATAACAATTTGGCACCCCTTGATCTTCAGACTCCCATTTCTTTTGACAACAACTACTTCAAGAATCTTGTTCAGAACAAAGGTCTTCTCCATTCTGATCAACAGCTTTTCAATGGCGGGTCTACCGATTCTATAGTGAGTGGATATAGTACTAATCCAAGCTCTTTTTCATCTGATTTTGCTGCTGCTATGATCAAGATGGGGGACATAAGTCCTCTTACAGGATCCAATGGAGAGATTAGGAAGAATTGTAGAACAACCAACTAA 945 0.4275 MIMSMTLFLLIILGSVNAQLSTSFYSTSCPKLSSTVQSTMQSAISKEARIGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFEVIDNIKTAVENVCPGVVSCADILAIAAADSVAILGGPSWNVKLGRRDAKTASQSAANTAIPAPTSNLNTLTSMFSAVGLSTKDLVTLSGGHTIGQARCTTFRTRIYNETNIDTSFATTRQSNCPNAAGSGDNNLAPLDLQTPISFDNNYFKNLVQNKGLLHSDQQLFNGGSTDSIVSGYSTNPSSFSSDFAAAMIKMGDISPLTGSNGEIRKNCRTTN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1548 314 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PANTHER PEROXIDASE 72-RELATED 6 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Psa5g1548 314 ProSiteProfiles Plant heme peroxidase family profile. 19 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PANTHER PEROXIDASE 6 312 - -
Psa5g1548 314 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 Gene3D - 24 311 - -
Psa5g1548 314 CDD secretory_peroxidase 19 311 IPR033905 GO:0004601|GO:0042744
Psa5g1548 314 SUPERFAMILY Heme-dependent peroxidases 19 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Psa5g1548 314 Pfam Peroxidase 36 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1548 314 Gene3D Peroxidase, domain 2 157 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1548 Psa-Chr5 121619444 121620728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1548 16 314 Peroxidase AT5G05340 78.261 1.27e-175 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1548 K00430 - gmx:100803637 523.857