Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1547 ATGTTTAGTGCCGTTGGTCTTTCCACCAAGGACTTGGTCACATTATCAGGTGGTCACACAATTGGACAAGCAAGGTGCACAACCTTTAGGACAAGAATCTACAACGAGACCAACATAGATACTTCTTTTGCTACTACGAGACAATCAAACTGTCCAAATGCAGCAGGCTCCGGGGATAACAATTTGGCACCCCTTGATCTTCAGACTCCCATTTCTTTCGACAACAACTACTTCAAGAATCTTGTTCAGAACAAAGGTCTTCTCCATTCAGACCAACAACTTTTTAGTGGTGGGTCTACCAACTCTATAGTGAGTGGATATAGTACTAATCCAAGTTCTTTTTCATCTGATTTTGCTGCTGCTATGATCAAGATGGGAGATATTAGTCCTCTTACAGGATCCAATGGAGAGATCAGGATGAATTGTAGAAAAACAAACTAA 441 0.4104 MFSAVGLSTKDLVTLSGGHTIGQARCTTFRTRIYNETNIDTSFATTRQSNCPNAAGSGDNNLAPLDLQTPISFDNNYFKNLVQNKGLLHSDQQLFSGGSTNSIVSGYSTNPSSFSSDFAAAMIKMGDISPLTGSNGEIRMNCRKTN* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1547 146 PANTHER PEROXIDASE 72-RELATED 2 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1547 146 Pfam Peroxidase 2 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1547 146 ProSiteProfiles Plant heme peroxidase family profile. 1 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1547 146 PANTHER PEROXIDASE 2 145 - -
Psa5g1547 146 PRINTS Plant peroxidase signature 10 22 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1547 146 PRINTS Plant peroxidase signature 64 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1547 146 PRINTS Plant peroxidase signature 80 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1547 146 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1547 146 SUPERFAMILY Heme-dependent peroxidases 1 146 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g1547 146 ProSitePatterns Peroxidases proximal heme-ligand signature. 11 21 IPR019793 -
Psa5g1547 146 Gene3D - 126 146 - -
Psa5g1547 146 Gene3D Peroxidase, domain 2 2 125 - -
Psa5g1547 146 PRINTS Haem peroxidase superfamily signature 11 26 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1547 146 PRINTS Haem peroxidase superfamily signature 66 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1547 Psa-Chr5 121566986 121568135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1547 2 146 Peroxidase AT5G05340 75.862 1.41e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1547 K00430 - gmx:100803637 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1547 5 121566986 121568135 Psa2g0641 2 33355516 33357119 ECH
Psa5g1547 5 121566986 121568135 Psa5g1547 5 121566986 121568135 ECH