Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1546 ATGGCTGCTTTAACTGACTCTAGATTAACCGTGATCGGTTTGGCTCTATTTGTTCTAATAATAGGAGGGAGTGTCAATGCAAACCTTTCTACAAACTTTTATTCGAGTTCTTGTCCTAAACTTCTTTCTACCGTGAAAGCTAACATGCAATCTGCCATATCAAAGGAGGCTCGAATTGGTGCTTCTATCCTCCGTTTATTCTTCCACGATTGTTTTGTCAACGGTTGTGATGGATCAATTCTACTCGATGACACGCCAACCTTTACCGGAGAGCAACACGCGGCTCCGAACAATAACTCTGCTCGTGGATTCGAAGTAATTGACAACATAAAATCAGCTGTAGAGAATATATGTCCCGGAATTGTATCATGTGCTGATATTCTTGCCATTGCAGCCGCAGATTCCGTCACAATTCTCGGAGGCCCAACCTGGAATGTAAAACTTGGAAGAAGAGACGCTAAGACAGCCAGTCAGTCTGCTGCACTTGCCTCCATTCCAAGACCAACTTCCGACCTCAATGTGCTTGCCAAAATGTTTAGTGATAATGGTCTTTCCATCAAGGACTTAGTCGCATTATCAGGTGGTCACACAATTGGACAAGCAAGATGCACAACTTTTAGGACAAGAATCTACAACGAGACTAACATAGATACTTCTTTTGCTACTACGAGACAATCAAATTGTCCAAATGCAGCAGGCTCCGGGGATAACAATTTGGCACCCCTTGATCTTCAGACTCCCATTTCTTTTGACAACAACTACTTCAAGAATCTTGTTCAGAACAAAGGTCTTCTCCATTCTGATCAACAGCTTTTCAACGGCGGGTCTACCGATTCTATAGTGAGTGGCTATAGTACTAATCCAAGTTCTTTTTCATGTGATTTTGCTGCGGCTATGATCAAGATGGGAGATATTAAACCTCTCACTGGATCAAATGGAGAGATCAGAAAGAATTGTGGAAAAATAAACTAA 972 0.4198 MAALTDSRLTVIGLALFVLIIGGSVNANLSTNFYSSSCPKLLSTVKANMQSAISKEARIGASILRLFFHDCFVNGCDGSILLDDTPTFTGEQHAAPNNNSARGFEVIDNIKSAVENICPGIVSCADILAIAAADSVTILGGPTWNVKLGRRDAKTASQSAALASIPRPTSDLNVLAKMFSDNGLSIKDLVALSGGHTIGQARCTTFRTRIYNETNIDTSFATTRQSNCPNAAGSGDNNLAPLDLQTPISFDNNYFKNLVQNKGLLHSDQQLFNGGSTDSIVSGYSTNPSSFSCDFAAAMIKMGDIKPLTGSNGEIRKNCGKIN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1546 323 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601|GO:0042744
Psa5g1546 323 SUPERFAMILY Heme-dependent peroxidases 28 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 Gene3D - 32 319 - -
Psa5g1546 323 PANTHER PEROXIDASE 9 323 - -
Psa5g1546 323 PANTHER PEROXIDASE 72-RELATED 9 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Psa5g1546 323 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Psa5g1546 323 Gene3D Peroxidase, domain 2 166 302 - -
Psa5g1546 323 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g1546 323 ProSiteProfiles Plant heme peroxidase family profile. 28 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1546 Psa-Chr5 121537591 121544097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1546 25 323 Peroxidase AT5G05340 74.916 1.43e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1546 K00430 - gmx:100803637 502.286